Note: Insertion ids mentioned in this report are for internal use (not linked to any database) and will change if the pipeline is re-run.
Note: A “unique” insertion is the merged result after the allele-aware merging from both callers for each patient, and then merged across patients. If we were working with SNPs, a “unique” SNP would be, rs123, for example, defined by its position and alternative(s) allele(s). A unique insertion is defined by its position, length, and inserted sequence.
The analysis has identified:
The stringent criterion (both callers) has left:
243 unique insertions that passed the stringent filtering. (9.3% of the total unique insertions), had at least one occurrence genotyped as 0/0.
These amount to 302 total count (6.1% of filter-passing occurrences).
155 of these unique insertions were genotyped as 0/0 for all their occurrences, amounting to 214 insertion counts.
Of these fully wrong calls, 96 were only found on a single patient each (61.9% of the 155).
The strict criteria missed calls for 91 unique insertions (3.5%).
These mean a total of 91 occurrences, out of 4 984 calls that passed the stringent filter.
91 unique insertions had more false negative occurrences than positive ones.
The discrepancies between genotyping and the lax filtering is also summarized in the table below.
Criterion | Unique INS with false positives (%) | Total false positives (%) | Unique INS (total) with all false positives | Unique INS with false negatives (%) | Total false negatives (Total positives) | Unique INS with more false negatives than positives |
|---|---|---|---|---|---|---|
Strict | 243 | 302 | 155 | 91 | 91 | 91 |
Lax | 612 | 771 | 501 | 0 | 0 | 0 |
The next sections only take into account insertions that passed the strict criterion on at least one sample, and that were not genotyped as 0/0 on all samples.
862 TE insertions were found on all cases in homozygosis.
Position | Length | Type | AF |
|---|---|---|---|
chr1:710 578 | 318 | SINE (AluYa5) | 1 |
chr1:1 993 703 | 146 | SINE (FLAM_C) | 1 |
chr1:7 953 092 | 96 | Retroposon (SVA_F) | 1 |
chr1:8 501 387 | 48 | Retroposon (SVA_F) | 1 |
chr1:9 170 364 | 317 | SINE (AluY) | 1 |
chr1:16 424 203 | 134 | SINE (AluYk2) | 1 |
chr1:21 166 094 | 316 | SINE (AluYa5) | 1 |
chr1:26 818 635 | 97 | Retroposon (SVA_F) | 1 |
chr1:28 410 097 | 124 | SINE (AluSc8) | 1 |
chr1:29 873 199 | 389 | LINE (L1MD) | 1 |
chr1:33 052 506 | 100 | Retroposon (SVA_F) | 1 |
chr1:38 485 066 | 75 | SINE (FRAM) | 1 |
chr1:45 330 021 | 326 | SINE (AluYb8) | 1 |
chr1:51 711 458 | 355 | Retroposon (SVA_A) | 1 |
chr1:52 869 965 | 98 | Retroposon (SVA_F) | 1 |
chr1:57 606 184 | 211 | SINE (AluYk2) | 1 |
chr1:63 473 989 | 117 | Retroposon (SVA_F) | 1 |
chr1:64 201 451 | 47 | Retroposon (SVA_F) | 1 |
chr1:64 492 377 | 346 | SINE (AluY) | 1 |
chr1:69 465 246 | 36 | LINE (L1P3) | 1 |
chr1:74 989 508 | 40 | LINE (L1P1) | 1 |
chr1:79 116 389 | 307 | SINE (AluYb9) | 1 |
chr1:80 387 550 | 320 | SINE (AluYa5) | 1 |
chr1:90 891 781 | 48 | Retroposon (SVA_F) | 1 |
chr1:92 701 961 | 321 | SINE (AluYa5) | 1 |
chr1:93 032 654 | 331 | SINE (AluYa5) | 1 |
chr1:94 877 128 | 299 | SINE (AluYa5) | 1 |
chr1:98 512 487 | 100 | Retroposon (SVA_F) | 1 |
chr1:100 528 653 | 325 | SINE (AluYb9) | 1 |
chr1:102 047 084 | 66 | LTR (MER50-int) | 1 |
chr1:103 272 218 | 97 | LTR (HERVL-int) | 1 |
chr1:105 788 296 | 192 | SINE (AluYk2) | 1 |
chr1:108 675 979 | 159 | Retroposon (SVA_A) | 1 |
chr1:112 774 364 | 177 | Retroposon (SVA_F) | 1 |
chr1:112 898 635 | 48 | Retroposon (SVA_F) | 1 |
chr1:117 430 034 | 174 | Retroposon (SVA_F) | 1 |
chr1:120 402 187 | 30 | SINE (Alu) | 1 |
chr1:125 013 224 | 222 | LINE (L1PA3) | 1 |
chr1:147 653 127 | 306 | SINE (AluY) | 1 |
chr1:147 949 446 | 117 | Retroposon (SVA_F) | 1 |
chr1:151 769 292 | 91 | Retroposon (SVA_C) | 1 |
chr1:159 449 991 | 90 | Retroposon (SVA_C) | 1 |
chr1:162 791 517 | 317 | SINE (AluYa5) | 1 |
chr1:163 344 640 | 327 | SINE (AluYa5) | 1 |
chr1:169 993 600 | 163 | SINE (AluSz) | 1 |
chr1:172 571 921 | 386 | Retroposon (SVA_E) | 1 |
chr1:176 396 707 | 126 | Retroposon (SVA_F) | 1 |
chr1:187 615 765 | 36 | Retroposon (SVA_A) | 1 |
chr1:191 119 508 | 135 | SINE (AluSx) | 1 |
chr1:196 184 400 | 324 | SINE (AluYb8) | 1 |
chr1:196 792 226 | 324 | SINE (AluYb8) | 1 |
chr1:196 811 780 | 153 | SINE (AluYa5) | 1 |
chr1:204 010 622 | 87 | LTR (MSTA) | 1 |
chr1:204 269 326 | 317 | SINE (AluYg6) | 1 |
chr1:211 460 647 | 419 | Retroposon (SVA_F) | 1 |
chr1:211 460 849 | 224 | Retroposon (SVA_E) | 1 |
chr1:217 828 482 | 324 | SINE (AluYa5) | 1 |
chr1:219 010 830 | 100 | LINE (L1MCa) | 1 |
chr1:220 466 557 | 98 | Retroposon (SVA_F) | 1 |
chr1:222 697 340 | 328 | SINE (AluYb8) | 1 |
chr1:226 114 913 | 47 | Retroposon (SVA_F) | 1 |
chr1:235 635 571 | 168 | LTR (MSTB) | 1 |
chr1:236 387 105 | 275 | Retroposon (SVA_A) | 1 |
chr1:237 286 555 | 204 | LINE (L1PB) | 1 |
chr1:244 941 424 | 133 | SINE (AluSp) | 1 |
chr1:245 826 009 | 323 | SINE (AluYa5) | 1 |
chr1:246 710 423 | 53 | LTR (MSTB) | 1 |
chr1:248 911 737 | 126 | Retroposon (SVA_F) | 1 |
chr2:1 467 941 | 331 | SINE (AluY) | 1 |
chr2:2 295 544 | 171 | LTR (HERVIP10FH-int) | 1 |
chr2:11 213 564 | 312 | SINE (AluYa5) | 1 |
chr2:11 286 233 | 325 | SINE (AluYa5) | 1 |
chr2:15 023 628 | 328 | SINE (AluYb9) | 1 |
chr2:21 573 937 | 297 | SINE (AluYd8) | 1 |
chr2:27 539 841 | 492 | Retroposon (SVA_F) | 1 |
chr2:31 336 819 | 318 | SINE (AluYa5) | 1 |
chr2:31 727 126 | 318 | SINE (AluYa5) | 1 |
chr2:36 777 087 | 305 | SINE (AluY) | 1 |
chr2:39 079 152 | 61 | LINE (L1M5) | 1 |
chr2:43 183 576 | 63 | SINE (AluSq2) | 1 |
chr2:44 588 252 | 125 | Retroposon (SVA_F) | 1 |
chr2:44 598 695 | 317 | SINE (AluYa5) | 1 |
chr2:47 092 140 | 329 | SINE (AluY) | 1 |
chr2:49 506 341 | 322 | SINE (AluYb8) | 1 |
chr2:50 375 489 | 328 | SINE (AluY) | 1 |
chr2:54 446 445 | 319 | SINE (AluY) | 1 |
chr2:54 889 449 | 313 | SINE (AluYe5) | 1 |
chr2:59 647 122 | 242 | SINE (AluYb8) | 1 |
chr2:60 418 626 | 63 | LTR (HERVH-int) | 1 |
chr2:63 552 086 | 328 | SINE (AluY) | 1 |
chr2:64 512 271 | 225 | Retroposon (SVA_F) | 1 |
chr2:73 898 351 | 318 | SINE (AluYa5) | 1 |
chr2:74 776 087 | 348 | SINE (AluYa5) | 1 |
chr2:75 160 773 | 315 | SINE (AluY) | 1 |
chr2:78 738 283 | 314 | SINE (AluYa5) | 1 |
chr2:81 359 182 | 87 | LINE (L1PREC2) | 1 |
chr2:82 938 173 | 40 | LTR (LTR12C) | 1 |
chr2:84 501 625 | 313 | SINE (AluYg6) | 1 |
chr2:87 180 576 | 492 | LINE (L1HS) | 1 |
chr2:113 348 853 | 318 | SINE (AluYa5) | 1 |
chr2:118 042 423 | 74 | LINE (L1P5) | 1 |
chr2:119 660 918 | 113 | LINE (L1MC4a) | 1 |
chr2:122 573 068 | 317 | SINE (AluYa5) | 1 |
chr2:127 881 317 | 322 | SINE (AluY) | 1 |
chr2:127 981 351 | 121 | LTR (LTR21B) | 1 |
chr2:139 757 713 | 44 | LINE (L1M1) | 1 |
chr2:144 589 184 | 324 | SINE (AluYb8) | 1 |
chr2:151 875 949 | 48 | Retroposon (SVA_F) | 1 |
chr2:152 391 750 | 325 | SINE (AluYg6) | 1 |
chr2:156 369 097 | 47 | Retroposon (SVA_F) | 1 |
chr2:157 653 842 | 324 | SINE (AluYb8) | 1 |
chr2:159 302 486 | 324 | SINE (AluYa5) | 1 |
chr2:161 095 804 | 298 | SINE (AluSx) | 1 |
chr2:168 287 804 | 284 | SINE (AluYa5) | 1 |
chr2:171 866 626 | 421 | Retroposon (SVA_F) | 1 |
chr2:172 657 428 | 146 | SINE (AluYa5) | 1 |
chr2:177 453 984 | 332 | SINE (AluYb8) | 1 |
chr2:177 486 725 | 339 | SINE (AluYb8) | 1 |
chr2:184 896 828 | 322 | SINE (AluYa5) | 1 |
chr2:188 711 105 | 90 | LTR (MER11B) | 1 |
chr2:189 094 694 | 310 | SINE (AluYa5) | 1 |
chr2:191 398 198 | 300 | Retroposon (SVA_E) | 1 |
chr2:191 742 647 | 48 | Retroposon (SVA_F) | 1 |
chr2:197 922 671 | 126 | Retroposon (SVA_F) | 1 |
chr2:200 773 343 | 968 | LINE (L1HS) | 1 |
chr2:202 534 993 | 49 | Retroposon (SVA_F) | 1 |
chr2:207 112 163 | 322 | SINE (AluYb8) | 1 |
chr2:207 607 676 | 315 | SINE (AluY) | 1 |
chr2:214 336 906 | 323 | SINE (AluYb8) | 1 |
chr2:221 579 721 | 36 | SINE (AluSg4) | 1 |
chr2:229 743 294 | 125 | Retroposon (SVA_F) | 1 |
chr2:232 246 907 | 127 | LINE (L1MD3) | 1 |
chr2:233 724 125 | 50 | Retroposon (SVA_F) | 1 |
chr3:4 163 465 | 316 | SINE (AluYa5) | 1 |
chr3:5 311 642 | 47 | LTR (LTR33A_v) | 1 |
chr3:10 070 475 | 212 | Retroposon (SVA_F) | 1 |
chr3:10 241 289 | 146 | SINE (AluSx) | 1 |
chr3:12 095 544 | 323 | SINE (AluY) | 1 |
chr3:18 993 945 | 320 | SINE (AluYb9) | 1 |
chr3:28 798 671 | 330 | SINE (AluY) | 1 |
chr3:32 002 688 | 94 | LTR (LTR65) | 1 |
chr3:34 737 405 | 42 | LINE (L1P4) | 1 |
chr3:35 469 102 | 65 | LTR (LTR12_v) | 1 |
chr3:38 358 205 | 289 | SINE (AluYb8) | 1 |
chr3:46 494 947 | 323 | Retroposon (SVA_E) | 1 |
chr3:48 483 720 | 48 | Retroposon (SVA_F) | 1 |
chr3:50 025 589 | 268 | SINE (AluYa5) | 1 |
chr3:50 084 780 | 77 | Retroposon (SVA_F) | 1 |
chr3:50 841 727 | 344 | SINE (AluYb8) | 1 |
chr3:61 671 974 | 39 | Retroposon (SVA_A) | 1 |
chr3:75 289 657 | 224 | Retroposon (SVA_F) | 1 |
chr3:78 583 006 | 39 | Retroposon (SVA_E) | 1 |
chr3:78 583 231 | 275 | Retroposon (SVA_E) | 1 |
chr3:78 583 374 | 49 | Retroposon (SVA_F) | 1 |
chr3:79 502 727 | 40 | LTR (LTR12C) | 1 |
chr3:79 619 091 | 52 | LTR (HERVH-int) | 1 |
chr3:80 248 694 | 45 | LINE (L1PREC2) | 1 |
chr3:83 254 913 | 137 | SINE (AluY) | 1 |
chr3:83 707 508 | 254 | LINE (L1PA8A) | 1 |
chr3:91 345 077 | 143 | LTR (MLT1D) | 1 |
chr3:91 361 104 | 243 | LINE (L1MEg) | 1 |
chr3:95 745 274 | 48 | Retroposon (SVA_B) | 1 |
chr3:100 458 406 | 311 | SINE (AluYa5) | 1 |
chr3:101 680 712 | 65 | SINE (AluJb) | 1 |
chr3:106 508 513 | 27 | DNA (HSMAR2) | 1 |
chr3:107 335 062 | 35 | LINE (L1HS) | 1 |
chr3:108 026 326 | 116 | Retroposon (SVA_A) | 1 |
chr3:110 694 546 | 281 | SINE (AluSx) | 1 |
chr3:111 444 270 | 32 | LINE (L1P3) | 1 |
chr3:111 507 514 | 335 | SINE (AluYb9) | 1 |
chr3:112 205 623 | 49 | LINE (L1P3) | 1 |
chr3:117 050 498 | 39 | Retroposon (SVA_D) | 1 |
chr3:123 407 764 | 310 | SINE (AluYa5) | 1 |
chr3:124 687 657 | 316 | SINE (AluYa5) | 1 |
chr3:124 922 699 | 134 | SINE (AluJr4) | 1 |
chr3:128 676 362 | 314 | SINE (AluYe5) | 1 |
chr3:129 339 096 | 48 | Retroposon (SVA_F) | 1 |
chr3:130 219 573 | 317 | SINE (AluYe5) | 1 |
chr3:134 199 945 | 38 | LTR (LTR12_v) | 1 |
chr3:136 893 195 | 105 | LINE (L1P5) | 1 |
chr3:141 159 482 | 50 | LINE (L1PA12) | 1 |
chr3:143 086 312 | 401 | Retroposon (SVA_E) | 1 |
chr3:145 526 548 | 322 | SINE (AluY) | 1 |
chr3:151 664 877 | 77 | LTR (HERV9N-int) | 1 |
chr3:157 848 540 | 37 | SINE (Alu) | 1 |
chr3:174 211 587 | 119 | LTR (LTR12C) | 1 |
chr3:174 211 749 | 119 | LTR (LTR12C) | 1 |
chr3:176 373 528 | 153 | LINE (L1HS) | 1 |
chr3:176 425 229 | 311 | SINE (AluYa5) | 1 |
chr3:182 153 132 | 129 | LINE (L1P3) | 1 |
chr3:189 398 051 | 326 | SINE (AluYa5) | 1 |
chr3:197 823 074 | 32 | SINE (Alu) | 1 |
chr3:197 847 677 | 57 | DNA (MADE1) | 1 |
chr4:2 570 071 | 317 | SINE (AluYa5) | 1 |
chr4:4 005 086 | 80 | LTR (HERVH-int) | 1 |
chr4:4 349 007 | 65 | LTR (LTR12) | 1 |
chr4:9 449 339 | 137 | LINE (L1M3) | 1 |
chr4:12 237 653 | 133 | SINE (AluYb8) | 1 |
chr4:13 761 218 | 146 | Retroposon (SVA_F) | 1 |
chr4:15 615 472 | 237 | LTR (LTR12C) | 1 |
chr4:36 323 570 | 314 | SINE (AluYb8) | 1 |
chr4:39 408 924 | 322 | SINE (AluYb8) | 1 |
chr4:42 086 022 | 315 | SINE (AluYa5) | 1 |
chr4:43 846 666 | 40 | LTR (LTR12E) | 1 |
chr4:44 963 877 | 36 | LTR (LTR3B_v) | 1 |
chr4:46 378 044 | 302 | Retroposon (SVA_F) | 1 |
chr4:46 782 419 | 40 | LTR (LTR12E) | 1 |
chr4:48 292 719 | 45 | Retroposon (SVA_F) | 1 |
chr4:52 081 945 | 147 | LINE (L3) | 1 |
chr4:52 465 601 | 48 | Retroposon (SVA_F) | 1 |
chr4:53 237 856 | 44 | Retroposon (SVA_F) | 1 |
chr4:54 325 449 | 147 | Retroposon (SVA_F) | 1 |
chr4:54 993 968 | 159 | LTR (LTR12C) | 1 |
chr4:58 110 152 | 101 | SINE (AluYa5) | 1 |
chr4:63 062 067 | 184 | LTR (LTR12E) | 1 |
chr4:63 697 451 | 308 | SINE (AluY) | 1 |
chr4:66 240 879 | 318 | SINE (AluYa5) | 1 |
chr4:67 098 159 | 307 | SINE (AluY) | 1 |
chr4:69 114 971 | 40 | LTR (LTR12C) | 1 |
chr4:69 762 349 | 175 | Retroposon (SVA_F) | 1 |
chr4:72 104 993 | 318 | SINE (AluYa5) | 1 |
chr4:78 238 350 | 318 | SINE (AluYa5) | 1 |
chr4:81 708 982 | 318 | SINE (AluYa5) | 1 |
chr4:83 182 608 | 621 | Retroposon (SVA_F) | 1 |
chr4:83 185 778 | 270 | Retroposon (SVA_F) | 1 |
chr4:83 186 020 | 48 | Retroposon (SVA_F) | 1 |
chr4:85 549 216 | 314 | SINE (AluY) | 1 |
chr4:106 399 078 | 64 | LINE (L1M4c) | 1 |
chr4:108 077 471 | 39 | Retroposon (SVA_E) | 1 |
chr4:108 659 089 | 30 | SINE (Alu) | 1 |
chr4:110 266 952 | 136 | SINE (AluSq) | 1 |
chr4:110 349 998 | 31 | LINE (L1P4) | 1 |
chr4:115 925 505 | 45 | LINE (L1M2) | 1 |
chr4:134 214 179 | 412 | LTR (HERVL40-int) | 1 |
chr4:138 304 044 | 331 | SINE (AluYi6_4d) | 1 |
chr4:140 017 765 | 151 | SINE (AluYa5) | 1 |
chr4:147 132 785 | 324 | SINE (AluY) | 1 |
chr4:150 660 232 | 98 | Retroposon (SVA_F) | 1 |
chr4:150 953 967 | 79 | Retroposon (SVA_A) | 1 |
chr4:151 214 794 | 126 | Retroposon (SVA_F) | 1 |
chr4:151 362 412 | 82 | SINE (AluY) | 1 |
chr4:157 637 145 | 140 | Retroposon (SVA_A) | 1 |
chr4:159 524 188 | 126 | Retroposon (SVA_F) | 1 |
chr4:163 836 593 | 223 | SINE (AluYd8) | 1 |
chr4:165 269 620 | 326 | SINE (AluYa5) | 1 |
chr4:173 123 062 | 319 | SINE (AluY) | 1 |
chr4:173 228 288 | 316 | SINE (AluY) | 1 |
chr4:174 613 139 | 327 | SINE (AluYe5) | 1 |
chr4:175 181 016 | 62 | LINE (L1PREC2) | 1 |
chr4:179 335 799 | 315 | SINE (AluYi6) | 1 |
chr4:185 056 645 | 309 | SINE (AluYa5) | 1 |
chr4:185 440 757 | 304 | SINE (AluYa5) | 1 |
chr4:186 491 744 | 54 | SINE (AluJb) | 1 |
chr4:189 404 990 | 71 | LTR (MST-int) | 1 |
chr5:1 812 525 | 312 | SINE (AluYa5) | 1 |
chr5:12 319 688 | 29 | LINE (L1PA14) | 1 |
chr5:18 673 483 | 62 | LTR (HERVH-int) | 1 |
chr5:18 673 574 | 64 | LTR (HERVH-int) | 1 |
chr5:20 471 978 | 280 | LINE (L2a) | 1 |
chr5:27 571 886 | 122 | SINE (AluJb) | 1 |
chr5:28 929 589 | 73 | Retroposon (SVA_F) | 1 |
chr5:32 762 455 | 329 | SINE (AluYb8) | 1 |
chr5:40 181 546 | 307 | SINE (AluYa5) | 1 |
chr5:54 087 760 | 65 | SINE (AluYk2) | 1 |
chr5:55 433 459 | 340 | SINE (AluYb8) | 1 |
chr5:55 569 961 | 320 | SINE (AluY) | 1 |
chr5:65 940 643 | 49 | Retroposon (SVA_F) | 1 |
chr5:69 515 538 | 97 | Retroposon (SVA_F) | 1 |
chr5:76 974 446 | 295 | SINE (AluYd8) | 1 |
chr5:77 395 389 | 313 | SINE (AluY) | 1 |
chr5:101 161 653 | 135 | SINE (AluY) | 1 |
chr5:104 113 189 | 49 | SINE (Alu) | 1 |
chr5:108 690 879 | 311 | SINE (AluYa5) | 1 |
chr5:111 450 624 | 186 | SINE (AluYc) | 1 |
chr5:115 404 024 | 289 | SINE (AluYe5) | 1 |
chr5:117 973 461 | 178 | LTR (MST-int) | 1 |
chr5:135 688 029 | 36 | LINE (L1MB3) | 1 |
chr5:137 538 121 | 127 | Retroposon (SVA_F) | 1 |
chr5:137 538 132 | 153 | Retroposon (SVA_F) | 1 |
chr5:140 215 541 | 327 | SINE (AluYb8) | 1 |
chr5:151 982 651 | 48 | LINE (L1PBa) | 1 |
chr5:154 657 244 | 316 | SINE (AluYb8) | 1 |
chr5:155 494 371 | 117 | LINE (L1HS) | 1 |
chr5:159 695 129 | 316 | SINE (AluY) | 1 |
chr5:161 104 485 | 329 | SINE (AluYb8) | 1 |
chr5:170 774 320 | 310 | SINE (AluYa5) | 1 |
chr5:176 306 174 | 50 | Retroposon (SVA_F) | 1 |
chr5:178 458 165 | 63 | LINE (L1MC5) | 1 |
chr6:6 034 535 | 319 | SINE (AluYa5) | 1 |
chr6:6 436 492 | 30 | LTR (LTR9D) | 1 |
chr6:7 441 878 | 81 | LTR (LTR12D) | 1 |
chr6:11 896 739 | 37 | LINE (L1MC) | 1 |
chr6:19 940 521 | 419 | Retroposon (SVA_F) | 1 |
chr6:21 353 449 | 62 | SINE (AluYb8) | 1 |
chr6:23 978 113 | 322 | SINE (AluY) | 1 |
chr6:26 753 983 | 335 | SINE (AluY) | 1 |
chr6:31 853 825 | 177 | Retroposon (SVA_F) | 1 |
chr6:32 501 766 | 325 | SINE (AluY) | 1 |
chr6:32 502 113 | 206 | SINE (AluYc) | 1 |
chr6:32 506 834 | 120 | SINE (AluY) | 1 |
chr6:32 547 334 | 87 | LTR (LTR12C) | 1 |
chr6:32 626 708 | 128 | LINE (L1MEc) | 1 |
chr6:32 720 800 | 317 | SINE (AluYe5) | 1 |
chr6:32 805 657 | 315 | SINE (AluYa5) | 1 |
chr6:34 398 183 | 177 | Retroposon (SVA_A) | 1 |
chr6:36 363 389 | 101 | LTR (LTR12C) | 1 |
chr6:38 964 348 | 345 | Retroposon (SVA_E) | 1 |
chr6:40 202 539 | 323 | SINE (AluY) | 1 |
chr6:43 927 736 | 317 | SINE (AluY) | 1 |
chr6:44 319 523 | 608 | LINE (L2) | 1 |
chr6:48 447 053 | 44 | SINE (AluSc) | 1 |
chr6:48 847 448 | 34 | LINE (L1PB) | 1 |
chr6:49 487 167 | 101 | LINE (L1MC5) | 1 |
chr6:52 969 272 | 72 | SINE (AluSq2) | 1 |
chr6:53 783 945 | 313 | SINE (AluYa5) | 1 |
chr6:57 311 175 | 36 | Retroposon (SVA_A) | 1 |
chr6:62 587 036 | 43 | LTR (HERVH-int) | 1 |
chr6:63 052 338 | 84 | LINE (L1PREC2) | 1 |
chr6:64 312 982 | 307 | LINE (L1P3) | 1 |
chr6:66 605 904 | 47 | LTR (HERVL-int) | 1 |
chr6:67 072 268 | 200 | LINE (L1M4) | 1 |
chr6:67 792 533 | 318 | SINE (AluYa5) | 1 |
chr6:73 601 480 | 273 | Retroposon (SVA_F) | 1 |
chr6:77 679 471 | 37 | DNA (Tigger3c) | 1 |
chr6:82 792 007 | 51 | LINE (L1M1) | 1 |
chr6:96 497 728 | 68 | LINE (L1P3) | 1 |
chr6:96 639 702 | 98 | LINE (L1P1) | 1 |
chr6:97 803 451 | 305 | SINE (AluYa5) | 1 |
chr6:103 902 688 | 324 | SINE (AluY) | 1 |
chr6:107 803 218 | 36 | Retroposon (SVA_D) | 1 |
chr6:114 768 707 | 105 | SINE (AluSc) | 1 |
chr6:120 247 099 | 319 | SINE (AluY) | 1 |
chr6:121 840 523 | 103 | LINE (L2a) | 1 |
chr6:141 014 727 | 131 | LTR (LTR12) | 1 |
chr6:146 455 303 | 60 | LTR (HERVH-int) | 1 |
chr6:146 455 384 | 61 | LTR (HERVH-int) | 1 |
chr6:148 178 700 | 126 | Retroposon (SVA_F) | 1 |
chr6:158 349 074 | 263 | Retroposon (SVA_A) | 1 |
chr6:158 783 393 | 325 | SINE (AluY) | 1 |
chr6:161 283 169 | 134 | SINE (AluSz) | 1 |
chr6:166 711 308 | 318 | SINE (AluYb9) | 1 |
chr6:170 185 527 | 331 | SINE (AluY) | 1 |
chr7:902 456 | 174 | SINE (AluSx) | 1 |
chr7:2 268 713 | 128 | Retroposon (SVA_F) | 1 |
chr7:6 904 663 | 59 | LTR (HERVH-int) | 1 |
chr7:22 813 858 | 315 | SINE (AluYa5) | 1 |
chr7:23 851 398 | 60 | LTR (MSTA) | 1 |
chr7:26 148 327 | 93 | Retroposon (SVA_C) | 1 |
chr7:37 797 033 | 310 | SINE (AluYe5) | 1 |
chr7:51 899 407 | 47 | LTR (MLT1A0) | 1 |
chr7:52 703 768 | 336 | LINE (L1MCa) | 1 |
chr7:52 721 764 | 354 | LINE (L1HS) | 1 |
chr7:56 177 209 | 323 | SINE (AluYb8) | 1 |
chr7:56 211 149 | 300 | SINE (AluYa5) | 1 |
chr7:64 809 491 | 125 | Retroposon (SVA_F) | 1 |
chr7:67 145 044 | 319 | SINE (AluYb8) | 1 |
chr7:71 737 530 | 106 | LTR (LTR12C) | 1 |
chr7:76 937 894 | 318 | SINE (AluYa5) | 1 |
chr7:77 534 007 | 176 | Retroposon (SVA_F) | 1 |
chr7:81 049 372 | 294 | SINE (AluYb8) | 1 |
chr7:83 222 425 | 314 | SINE (AluYb8) | 1 |
chr7:83 460 625 | 63 | LTR (HERVH-int) | 1 |
chr7:83 871 366 | 186 | SINE (AluYc) | 1 |
chr7:84 299 804 | 69 | SINE (AluY) | 1 |
chr7:98 568 472 | 326 | SINE (AluYa5) | 1 |
chr7:109 017 025 | 51 | LINE (L1PREC2) | 1 |
chr7:109 643 280 | 328 | SINE (AluYb8) | 1 |
chr7:114 192 070 | 49 | SINE (AluSx4) | 1 |
chr7:118 443 246 | 317 | SINE (AluYe5) | 1 |
chr7:124 141 305 | 281 | SINE (AluYk2) | 1 |
chr7:125 022 558 | 167 | LTR (THE1-int) | 1 |
chr7:128 552 994 | 33 | SINE (AluSq) | 1 |
chr7:128 569 092 | 242 | SINE (AluYa5) | 1 |
chr7:129 476 156 | 91 | Retroposon (SVA_F) | 1 |
chr7:129 517 319 | 318 | SINE (AluSx) | 1 |
chr7:136 576 160 | 318 | LTR (HERVL-int) | 1 |
chr7:139 101 477 | 364 | Retroposon (SVA_A) | 1 |
chr7:142 659 889 | 329 | SINE (AluYb8) | 1 |
chr7:149 554 812 | 49 | Retroposon (SVA_F) | 1 |
chr7:152 540 441 | 130 | SINE (AluSx) | 1 |
chr7:155 066 495 | 319 | SINE (AluYk2) | 1 |
chr7:155 096 904 | 73 | Retroposon (SVA_B) | 1 |
chr7:157 558 082 | 339 | SINE (AluYb8) | 1 |
chr7:157 656 079 | 316 | SINE (AluY) | 1 |
chr8:2 089 226 | 45 | SINE (Alu) | 1 |
chr8:6 187 437 | 317 | SINE (AluYk2) | 1 |
chr8:6 196 793 | 91 | LINE (L1P2) | 1 |
chr8:9 153 999 | 48 | Retroposon (SVA_F) | 1 |
chr8:9 950 379 | 327 | SINE (AluYb8) | 1 |
chr8:10 468 757 | 319 | SINE (AluYa5) | 1 |
chr8:13 059 194 | 154 | SINE (AluSx4) | 1 |
chr8:16 245 296 | 275 | SINE (AluYa5) | 1 |
chr8:22 922 448 | 348 | SINE (AluYb8) | 1 |
chr8:41 412 938 | 332 | SINE (AluYb8) | 1 |
chr8:54 125 427 | 225 | Retroposon (SVA_F) | 1 |
chr8:54 750 628 | 41 | LTR (LTR12F) | 1 |
chr8:61 752 508 | 100 | Retroposon (SVA_F) | 1 |
chr8:64 686 420 | 77 | Retroposon (SVA_F) | 1 |
chr8:69 245 767 | 39 | Retroposon (SVA_E) | 1 |
chr8:71 002 341 | 333 | SINE (AluYb8) | 1 |
chr8:73 845 055 | 41 | Retroposon (SVA_F) | 1 |
chr8:74 463 097 | 318 | SINE (AluYa5) | 1 |
chr8:86 302 813 | 115 | LINE (L1HS) | 1 |
chr8:86 964 152 | 73 | LTR (MER52-int) | 1 |
chr8:87 744 769 | 317 | SINE (AluYa5) | 1 |
chr8:94 591 076 | 48 | Retroposon (SVA_F) | 1 |
chr8:94 591 439 | 50 | Retroposon (SVA_F) | 1 |
chr8:95 771 303 | 320 | SINE (AluYa5) | 1 |
chr8:97 447 378 | 31 | SINE (Alu) | 1 |
chr8:97 841 152 | 40 | Retroposon (SVA_D) | 1 |
chr8:106 195 649 | 311 | SINE (AluYb9) | 1 |
chr8:116 034 779 | 275 | SINE (AluYg6) | 1 |
chr8:124 877 714 | 283 | SINE (AluYa5) | 1 |
chr8:126 853 220 | 290 | SINE (AluY) | 1 |
chr8:127 025 866 | 325 | SINE (AluYb8) | 1 |
chr8:127 316 510 | 48 | Retroposon (SVA_F) | 1 |
chr8:131 341 813 | 322 | SINE (AluYa5) | 1 |
chr8:138 313 721 | 313 | SINE (AluY) | 1 |
chr8:140 501 180 | 189 | LINE (L2) | 1 |
chr8:140 950 042 | 69 | LTR (MER52A) | 1 |
chr9:848 895 | 334 | SINE (AluY) | 1 |
chr9:2 298 287 | 191 | LINE (L2a) | 1 |
chr9:7 852 522 | 326 | SINE (AluYb9) | 1 |
chr9:15 365 380 | 391 | LTR (LTR12D) | 1 |
chr9:15 365 452 | 392 | LTR (LTR12D) | 1 |
chr9:16 977 542 | 38 | Retroposon (SVA_F) | 1 |
chr9:21 127 606 | 29 | LINE (L1P1) | 1 |
chr9:22 288 707 | 335 | SINE (AluYa5) | 1 |
chr9:26 492 844 | 36 | Retroposon (SVA_F) | 1 |
chr9:31 796 037 | 43 | LINE (L1M3) | 1 |
chr9:32 906 891 | 65 | LTR (LTR12) | 1 |
chr9:34 904 795 | 103 | LINE (L1PB) | 1 |
chr9:34 937 015 | 46 | Retroposon (SVA_F) | 1 |
chr9:35 918 454 | 31 | SINE (Alu) | 1 |
chr9:38 767 762 | 313 | SINE (AluYe5) | 1 |
chr9:42 463 052 | 191 | SINE (AluYb8) | 1 |
chr9:67 083 505 | 299 | SINE (AluY) | 1 |
chr9:70 917 552 | 318 | SINE (AluYa5) | 1 |
chr9:71 929 859 | 335 | SINE (AluYb8) | 1 |
chr9:74 197 755 | 61 | Retroposon (SVA_F) | 1 |
chr9:88 689 440 | 293 | LTR (PABL_A-int) | 1 |
chr9:88 691 152 | 233 | LTR (MER41-int) | 1 |
chr9:97 796 578 | 39 | Retroposon (SVA_F) | 1 |
chr9:107 460 892 | 61 | SINE (AluYa5) | 1 |
chr9:109 499 102 | 307 | SINE (AluYa5) | 1 |
chr9:112 514 852 | 225 | Retroposon (SVA_A) | 1 |
chr9:112 525 962 | 261 | Retroposon (SVA_F) | 1 |
chr9:116 840 550 | 351 | Retroposon (SVA_F) | 1 |
chr9:120 292 891 | 315 | SINE (AluYk2) | 1 |
chr9:123 802 498 | 79 | LINE (L2) | 1 |
chr9:125 458 887 | 431 | Retroposon (SVA_E) | 1 |
chr9:125 577 664 | 258 | Retroposon (SVA_F) | 1 |
chr9:129 514 659 | 70 | LTR (MER52A) | 1 |
chr10:3 526 815 | 315 | SINE (AluYg6) | 1 |
chr10:9 469 017 | 316 | SINE (AluYa5) | 1 |
chr10:14 442 801 | 327 | SINE (AluYa5) | 1 |
chr10:17 950 558 | 118 | LTR (LTR12D) | 1 |
chr10:21 057 584 | 49 | SINE (Alu) | 1 |
chr10:21 737 161 | 34 | SINE (AluJb) | 1 |
chr10:23 486 747 | 330 | SINE (AluYb8) | 1 |
chr10:25 756 463 | 209 | LTR (LTR12C) | 1 |
chr10:27 355 669 | 391 | LINE (L1PA7) | 1 |
chr10:28 813 597 | 314 | SINE (AluY) | 1 |
chr10:30 607 170 | 126 | SINE (AluSx) | 1 |
chr10:32 647 469 | 54 | SINE (FRAM) | 1 |
chr10:35 706 124 | 317 | SINE (AluY) | 1 |
chr10:36 657 456 | 304 | SINE (AluY) | 1 |
chr10:39 479 344 | 342 | LINE (L1P1) | 1 |
chr10:46 876 544 | 303 | SINE (AluYe5) | 1 |
chr10:47 319 408 | 303 | SINE (AluYa5) | 1 |
chr10:52 102 653 | 275 | SINE (AluYk2) | 1 |
chr10:52 707 167 | 323 | SINE (AluY) | 1 |
chr10:53 046 194 | 313 | SINE (AluYe5) | 1 |
chr10:54 167 762 | 83 | LTR (HERVH-int) | 1 |
chr10:54 223 519 | 324 | SINE (AluYa5) | 1 |
chr10:55 002 597 | 62 | LTR (LOR1-int) | 1 |
chr10:56 214 858 | 302 | SINE (AluYa5) | 1 |
chr10:56 724 090 | 48 | SINE (AluYh7) | 1 |
chr10:59 225 142 | 326 | SINE (AluYa5) | 1 |
chr10:62 751 124 | 324 | SINE (AluYa5) | 1 |
chr10:62 928 980 | 39 | Retroposon (SVA_A) | 1 |
chr10:68 235 132 | 326 | SINE (AluYb8) | 1 |
chr10:69 850 403 | 310 | SINE (AluYa5) | 1 |
chr10:69 992 835 | 494 | Retroposon (SVA_E) | 1 |
chr10:70 239 928 | 110 | Retroposon (SVA_A) | 1 |
chr10:70 407 971 | 341 | Retroposon (SVA_E) | 1 |
chr10:74 470 576 | 142 | LINE (L1M3) | 1 |
chr10:75 333 382 | 180 | Retroposon (SVA_F) | 1 |
chr10:75 333 655 | 87 | Retroposon (SVA_F) | 1 |
chr10:83 907 450 | 208 | LTR (LTR69) | 1 |
chr10:87 613 907 | 326 | SINE (AluYb8) | 1 |
chr10:87 655 672 | 142 | SINE (AluYa5) | 1 |
chr10:92 975 822 | 223 | Retroposon (SVA_A) | 1 |
chr10:99 251 497 | 95 | LINE (L1P4) | 1 |
chr10:101 975 999 | 320 | SINE (AluYa5) | 1 |
chr10:102 036 178 | 141 | Retroposon (SVA_F) | 1 |
chr10:104 057 438 | 194 | SINE (AluYb8) | 1 |
chr10:106 131 787 | 293 | SINE (AluY) | 1 |
chr10:107 231 509 | 320 | SINE (AluY) | 1 |
chr10:119 261 069 | 48 | Retroposon (SVA_F) | 1 |
chr10:120 215 119 | 402 | Retroposon (SVA_F) | 1 |
chr10:120 798 700 | 39 | Retroposon (SVA_F) | 1 |
chr10:130 096 568 | 97 | LINE (L1PA7) | 1 |
chr11:696 721 | 134 | SINE (AluJb) | 1 |
chr11:2 238 133 | 61 | LTR (ERVL-B4-int) | 1 |
chr11:3 246 565 | 142 | SINE (AluYa5) | 1 |
chr11:4 283 214 | 156 | Retroposon (SVA_B) | 1 |
chr11:8 865 752 | 318 | SINE (AluYk2) | 1 |
chr11:13 791 469 | 332 | SINE (AluYb9) | 1 |
chr11:19 860 081 | 223 | Retroposon (SVA_E) | 1 |
chr11:22 241 253 | 124 | LINE (L1PA16) | 1 |
chr11:23 336 957 | 313 | SINE (AluYa5) | 1 |
chr11:32 870 496 | 331 | SINE (AluYb8) | 1 |
chr11:37 684 733 | 318 | SINE (AluYa5) | 1 |
chr11:41 072 280 | 87 | DNA (Tigger1) | 1 |
chr11:45 738 460 | 277 | Retroposon (SVA_B) | 1 |
chr11:47 097 418 | 48 | Retroposon (SVA_F) | 1 |
chr11:47 429 529 | 42 | SINE (AluJb) | 1 |
chr11:48 734 293 | 348 | LINE (L1HS) | 1 |
chr11:48 911 556 | 314 | SINE (AluY) | 1 |
chr11:55 553 016 | 337 | SINE (AluY) | 1 |
chr11:56 535 869 | 316 | SINE (AluYg6) | 1 |
chr11:58 006 638 | 131 | SINE (AluYa5) | 1 |
chr11:58 139 863 | 65 | LINE (L1P2) | 1 |
chr11:59 645 329 | 383 | Retroposon (SVA_E) | 1 |
chr11:61 377 728 | 311 | SINE (AluYk12) | 1 |
chr11:63 931 433 | 308 | SINE (AluSx) | 1 |
chr11:65 239 632 | 130 | Retroposon (SVA_F) | 1 |
chr11:74 066 263 | 48 | LINE (L1PA5) | 1 |
chr11:74 353 859 | 76 | Retroposon (SVA_C) | 1 |
chr11:83 133 354 | 39 | Retroposon (SVA_B) | 1 |
chr11:86 110 821 | 355 | Retroposon (SVA_F) | 1 |
chr11:89 175 768 | 323 | SINE (AluY) | 1 |
chr11:90 267 331 | 186 | LINE (L1P3) | 1 |
chr11:91 420 411 | 175 | SINE (AluYc) | 1 |
chr11:93 621 562 | 51 | LTR (THE1C) | 1 |
chr11:93 946 760 | 454 | Retroposon (SVA_E) | 1 |
chr11:95 135 520 | 41 | SINE (Alu) | 1 |
chr11:95 320 834 | 49 | Retroposon (SVA_F) | 1 |
chr11:95 321 129 | 50 | Retroposon (SVA_F) | 1 |
chr11:98 770 105 | 208 | Retroposon (SVA_A) | 1 |
chr11:103 330 537 | 324 | SINE (AluYb8) | 1 |
chr11:106 195 313 | 136 | SINE (AluSx) | 1 |
chr11:106 299 739 | 313 | SINE (AluYa5) | 1 |
chr11:111 211 677 | 43 | LINE (L1MC) | 1 |
chr11:116 130 921 | 182 | LTR (HERVIP10FH-int) | 1 |
chr11:119 253 538 | 265 | Retroposon (SVA_A) | 1 |
chr11:125 863 407 | 266 | Retroposon (SVA_F) | 1 |
chr11:125 863 905 | 129 | Retroposon (SVA_D) | 1 |
chr11:129 889 646 | 315 | SINE (AluYa5) | 1 |
chr11:131 308 282 | 134 | SINE (AluSz) | 1 |
chr11:134 435 747 | 317 | LINE (L1HS) | 1 |
chr12:676 194 | 133 | SINE (AluYk2) | 1 |
chr12:3 768 367 | 133 | SINE (AluJb) | 1 |
chr12:7 451 371 | 285 | SINE (AluYa5) | 1 |
chr12:8 184 249 | 400 | Retroposon (SVA_F) | 1 |
chr12:8 184 716 | 48 | Retroposon (SVA_F) | 1 |
chr12:10 081 587 | 318 | SINE (AluY) | 1 |
chr12:19 340 417 | 36 | Retroposon (SVA_F) | 1 |
chr12:20 755 735 | 319 | SINE (AluYb9) | 1 |
chr12:20 764 123 | 41 | LTR (HERVH-int) | 1 |
chr12:21 970 847 | 320 | SINE (AluYa5) | 1 |
chr12:25 309 998 | 328 | SINE (AluY) | 1 |
chr12:26 784 941 | 39 | Retroposon (SVA_D) | 1 |
chr12:29 411 798 | 33 | LINE (L1P1) | 1 |
chr12:31 650 024 | 315 | SINE (AluSx) | 1 |
chr12:32 098 864 | 144 | SINE (AluSx) | 1 |
chr12:45 025 760 | 310 | SINE (AluYa5) | 1 |
chr12:48 332 461 | 97 | Retroposon (SVA_F) | 1 |
chr12:48 500 573 | 220 | Retroposon (SVA_F) | 1 |
chr12:53 354 590 | 320 | SINE (AluYa5) | 1 |
chr12:54 488 739 | 39 | Retroposon (SVA_D) | 1 |
chr12:57 689 480 | 313 | SINE (AluYa5) | 1 |
chr12:58 825 264 | 321 | SINE (AluYb8) | 1 |
chr12:60 660 033 | 282 | SINE (AluYb8) | 1 |
chr12:63 686 932 | 118 | Retroposon (SVA_A) | 1 |
chr12:63 708 449 | 76 | SINE (AluSg) | 1 |
chr12:64 783 847 | 188 | SINE (AluSp) | 1 |
chr12:77 093 950 | 174 | LINE (L1P1) | 1 |
chr12:78 605 707 | 304 | SINE (AluYb8) | 1 |
chr12:86 811 026 | 109 | LINE (L1MD) | 1 |
chr12:87 477 036 | 319 | SINE (AluY) | 1 |
chr12:87 944 381 | 306 | SINE (AluYa5) | 1 |
chr12:92 118 740 | 28 | DNA (HSMAR2) | 1 |
chr12:93 291 513 | 133 | SINE (AluY) | 1 |
chr12:95 355 501 | 310 | SINE (AluSx) | 1 |
chr12:97 101 565 | 330 | SINE (AluYb8) | 1 |
chr12:99 387 859 | 177 | SINE (AluY) | 1 |
chr12:100 294 427 | 196 | Retroposon (SVA_D) | 1 |
chr12:103 643 940 | 48 | Retroposon (SVA_F) | 1 |
chr12:104 923 205 | 187 | SINE (AluYb9) | 1 |
chr12:106 209 872 | 286 | LINE (L1P3) | 1 |
chr12:124 101 925 | 48 | Retroposon (SVA_F) | 1 |
chr12:125 036 157 | 162 | SINE (AluJb) | 1 |
chr12:131 926 411 | 79 | Retroposon (SVA_A) | 1 |
chr13:18 196 939 | 197 | SINE (AluYb8) | 1 |
chr13:19 032 018 | 329 | SINE (AluYb9) | 1 |
chr13:19 251 656 | 416 | LINE (L1PBa) | 1 |
chr13:19 779 555 | 48 | Retroposon (SVA_F) | 1 |
chr13:21 320 624 | 286 | SINE (AluYb8) | 1 |
chr13:21 614 339 | 316 | SINE (AluYa5) | 1 |
chr13:21 956 209 | 313 | SINE (AluYa5) | 1 |
chr13:22 859 002 | 47 | Retroposon (SVA_F) | 1 |
chr13:22 859 350 | 39 | Retroposon (SVA_C) | 1 |
chr13:25 264 752 | 135 | SINE (AluYa5) | 1 |
chr13:28 990 621 | 66 | LTR (LTR12) | 1 |
chr13:37 215 551 | 164 | SINE (AluSx) | 1 |
chr13:37 607 837 | 337 | SINE (AluYb9) | 1 |
chr13:39 789 563 | 28 | LTR (LTR10F) | 1 |
chr13:40 955 535 | 98 | Retroposon (SVA_F) | 1 |
chr13:42 141 027 | 29 | LINE (L1PA5) | 1 |
chr13:42 476 405 | 110 | Retroposon (SVA_A) | 1 |
chr13:46 521 202 | 318 | SINE (AluYa5) | 1 |
chr13:46 557 525 | 328 | SINE (AluYa5) | 1 |
chr13:49 599 221 | 314 | SINE (AluYk12) | 1 |
chr13:52 080 023 | 39 | Retroposon (SVA_A) | 1 |
chr13:54 937 595 | 55 | LTR (LTR21A) | 1 |
chr13:57 014 879 | 119 | SINE (AluY) | 1 |
chr13:58 046 916 | 290 | SINE (AluYb9) | 1 |
chr13:58 773 222 | 85 | LTR (LTR12C) | 1 |
chr13:58 822 744 | 315 | SINE (AluYg6) | 1 |
chr13:60 037 033 | 130 | LINE (L1MEd) | 1 |
chr13:60 715 401 | 390 | LINE (L1HS) | 1 |
chr13:67 329 321 | 237 | SINE (AluYe5) | 1 |
chr13:78 010 527 | 313 | SINE (AluYa5) | 1 |
chr13:78 077 535 | 313 | SINE (AluYa5) | 1 |
chr13:78 697 449 | 318 | SINE (AluYa5) | 1 |
chr13:86 740 691 | 291 | SINE (AluY) | 1 |
chr13:87 043 983 | 254 | SINE (AluYe5) | 1 |
chr13:89 898 305 | 322 | SINE (AluYe5) | 1 |
chr13:90 291 101 | 57 | LTR (HERVP71A-int) | 1 |
chr13:90 295 387 | 321 | SINE (AluY) | 1 |
chr13:91 861 711 | 294 | SINE (AluYa5) | 1 |
chr13:93 176 152 | 301 | SINE (AluYa5) | 1 |
chr13:94 597 248 | 144 | SINE (AluYa5) | 1 |
chr13:99 242 798 | 40 | Retroposon (SVA_B) | 1 |
chr13:99 430 356 | 320 | SINE (AluY) | 1 |
chr13:107 887 391 | 62 | LTR (MSTA) | 1 |
chr13:108 067 459 | 316 | SINE (AluYb8) | 1 |
chr13:113 357 049 | 132 | SINE (AluSc) | 1 |
chr14:24 473 726 | 118 | LTR (LTR12D) | 1 |
chr14:27 832 046 | 439 | LINE (L1HS) | 1 |
chr14:31 408 945 | 36 | SINE (AluYb8) | 1 |
chr14:34 483 262 | 316 | SINE (AluY) | 1 |
chr14:39 285 662 | 47 | Retroposon (SVA_F) | 1 |
chr14:39 843 742 | 321 | SINE (AluYa5) | 1 |
chr14:42 772 605 | 66 | LINE (L1P3) | 1 |
chr14:43 602 083 | 513 | LINE (L1P1) | 1 |
chr14:50 965 360 | 326 | SINE (AluYb8) | 1 |
chr14:52 837 362 | 56 | LTR (MER51B) | 1 |
chr14:63 139 925 | 28 | LINE (L1P1) | 1 |
chr14:70 397 965 | 57 | LTR (MER52D) | 1 |
chr14:73 353 583 | 134 | SINE (AluSz6) | 1 |
chr14:73 546 923 | 185 | SINE (AluYe5) | 1 |
chr14:82 276 282 | 195 | LTR (LTR8) | 1 |
chr14:85 829 872 | 39 | Retroposon (SVA_E) | 1 |
chr14:86 164 343 | 314 | SINE (AluY) | 1 |
chr14:89 608 202 | 143 | SINE (AluSx) | 1 |
chr14:90 718 834 | 322 | SINE (AluYb9) | 1 |
chr14:91 649 660 | 317 | SINE (AluY) | 1 |
chr14:91 658 708 | 312 | SINE (AluYa5) | 1 |
chr14:98 678 770 | 53 | SINE (Alu) | 1 |
chr14:102 562 101 | 312 | SINE (AluY) | 1 |
chr14:102 676 504 | 171 | Retroposon (SVA_F) | 1 |
chr14:105 111 436 | 226 | Retroposon (SVA_F) | 1 |
chr14:105 112 172 | 257 | Retroposon (SVA_F) | 1 |
chr15:23 103 992 | 321 | SINE (AluYb8) | 1 |
chr15:44 531 316 | 302 | SINE (AluYa5) | 1 |
chr15:45 277 713 | 311 | SINE (AluYa5) | 1 |
chr15:45 290 055 | 32 | SINE (Alu) | 1 |
chr15:45 293 091 | 48 | Retroposon (SVA_F) | 1 |
chr15:47 279 101 | 87 | LINE (L1P1) | 1 |
chr15:50 877 475 | 60 | SINE (MIR3) | 1 |
chr15:56 541 721 | 296 | SINE (AluY) | 1 |
chr15:62 026 065 | 327 | SINE (AluY) | 1 |
chr15:66 375 798 | 323 | SINE (AluYb9) | 1 |
chr15:67 352 555 | 318 | SINE (AluYa5) | 1 |
chr15:71 757 533 | 133 | SINE (AluJr4) | 1 |
chr15:71 769 394 | 126 | Retroposon (SVA_F) | 1 |
chr15:72 347 195 | 318 | SINE (AluYa5) | 1 |
chr15:72 396 768 | 527 | Retroposon (SVA_F) | 1 |
chr15:75 481 586 | 401 | Retroposon (SVA_F) | 1 |
chr15:75 503 575 | 196 | Retroposon (SVA_E) | 1 |
chr15:80 355 807 | 93 | SINE (AluSp) | 1 |
chr15:85 681 718 | 325 | SINE (AluYk2) | 1 |
chr15:88 941 916 | 118 | Retroposon (SVA_A) | 1 |
chr15:88 942 035 | 67 | Retroposon (SVA_B) | 1 |
chr15:89 854 810 | 78 | Retroposon (SVA_F) | 1 |
chr15:93 292 547 | 315 | SINE (AluYa5) | 1 |
chr15:95 584 536 | 291 | SINE (AluYa5) | 1 |
chr16:5 202 288 | 126 | Retroposon (SVA_A) | 1 |
chr16:5 295 016 | 320 | SINE (AluYa5) | 1 |
chr16:10 992 534 | 314 | SINE (AluYa5) | 1 |
chr16:11 940 567 | 36 | SINE (AluSg4) | 1 |
chr16:18 079 930 | 36 | SINE (FRAM) | 1 |
chr16:24 108 962 | 48 | Retroposon (SVA_F) | 1 |
chr16:31 104 754 | 353 | Retroposon (SVA_E) | 1 |
chr16:31 105 127 | 147 | Retroposon (SVA_F) | 1 |
chr16:36 260 385 | 242 | LINE (L1HS) | 1 |
chr16:50 358 349 | 29 | SINE (AluJb) | 1 |
chr16:53 841 055 | 324 | SINE (AluYb8) | 1 |
chr16:69 738 409 | 99 | SINE (AluSc8) | 1 |
chr16:75 574 801 | 43 | SINE (AluYh3) | 1 |
chr16:81 095 628 | 27 | SINE (Alu) | 1 |
chr16:82 131 072 | 299 | SINE (AluY) | 1 |
chr16:82 165 723 | 36 | DNA (Tigger3c) | 1 |
chr16:89 224 966 | 334 | SINE (AluY) | 1 |
chr17:1 276 784 | 434 | SINE (AluSx) | 1 |
chr17:1 690 049 | 38 | Retroposon (SVA_D) | 1 |
chr17:2 448 181 | 125 | Retroposon (SVA_B) | 1 |
chr17:2 548 310 | 169 | SINE (AluSx) | 1 |
chr17:4 274 926 | 27 | SINE (Alu) | 1 |
chr17:4 411 686 | 259 | LINE (L1HS) | 1 |
chr17:5 069 184 | 325 | SINE (AluSx) | 1 |
chr17:16 095 666 | 104 | Retroposon (SVA_F) | 1 |
chr17:16 330 605 | 317 | SINE (AluYe5) | 1 |
chr17:16 699 504 | 133 | SINE (AluYk2) | 1 |
chr17:19 627 935 | 524 | Retroposon (SVA_F) | 1 |
chr17:20 638 094 | 193 | SINE (AluSx) | 1 |
chr17:28 604 078 | 97 | Retroposon (SVA_F) | 1 |
chr17:31 675 941 | 65 | LTR (LTR12) | 1 |
chr17:38 930 729 | 49 | Retroposon (SVA_F) | 1 |
chr17:42 973 221 | 273 | Retroposon (SVA_F) | 1 |
chr17:46 252 889 | 39 | Retroposon (SVA_D) | 1 |
chr17:46 253 241 | 39 | Retroposon (SVA_D) | 1 |
chr17:47 325 026 | 261 | SINE (AluYa5) | 1 |
chr17:49 125 777 | 224 | Retroposon (SVA_F) | 1 |
chr17:52 321 128 | 321 | SINE (AluYa5) | 1 |
chr17:52 953 842 | 311 | SINE (AluYa5) | 1 |
chr17:62 996 973 | 190 | SINE (AluYc) | 1 |
chr17:63 488 528 | 290 | SINE (AluYa5) | 1 |
chr17:67 763 856 | 42 | SINE (AluSz6) | 1 |
chr17:72 700 020 | 318 | SINE (AluYa5) | 1 |
chr17:75 298 385 | 137 | SINE (AluSx3) | 1 |
chr17:76 610 524 | 41 | LTR (HERVH-int) | 1 |
chr18:1 235 775 | 321 | SINE (AluY) | 1 |
chr18:12 980 715 | 49 | Retroposon (SVA_F) | 1 |
chr18:15 779 866 | 217 | LINE (L1P1) | 1 |
chr18:22 091 021 | 316 | SINE (AluY) | 1 |
chr18:29 997 108 | 32 | LTR (THE1D-int) | 1 |
chr18:30 220 884 | 320 | SINE (AluYb8) | 1 |
chr18:35 271 443 | 40 | LTR (LTR12C) | 1 |
chr18:36 077 580 | 48 | Retroposon (SVA_F) | 1 |
chr18:48 997 462 | 113 | SINE (AluYb8) | 1 |
chr18:49 621 064 | 243 | SINE (AluSx) | 1 |
chr18:54 236 358 | 167 | LINE (L1HS) | 1 |
chr18:63 018 865 | 321 | SINE (AluY) | 1 |
chr18:65 820 032 | 317 | SINE (AluY) | 1 |
chr18:68 731 923 | 315 | SINE (AluYk2) | 1 |
chr18:68 905 255 | 332 | SINE (AluYb8) | 1 |
chr18:76 241 968 | 322 | SINE (AluYi6_4d) | 1 |
chr18:76 851 081 | 311 | SINE (AluYk2) | 1 |
chr18:78 280 924 | 132 | LINE (L1P4) | 1 |
chr19:4 965 572 | 166 | SINE (AluJb) | 1 |
chr19:5 761 462 | 154 | LTR (MSTA) | 1 |
chr19:6 923 838 | 323 | SINE (AluYb8) | 1 |
chr19:10 715 006 | 135 | SINE (AluSz) | 1 |
chr19:12 621 713 | 307 | Retroposon (SVA_F) | 1 |
chr19:13 703 694 | 126 | Retroposon (SVA_F) | 1 |
chr19:17 722 278 | 164 | SINE (AluJb) | 1 |
chr19:20 149 557 | 148 | Retroposon (SVA_E) | 1 |
chr19:20 563 164 | 316 | SINE (AluYj4) | 1 |
chr19:20 858 616 | 38 | LTR (HERVIP10FH-int) | 1 |
chr19:23 734 249 | 312 | SINE (AluYb8) | 1 |
chr19:23 768 604 | 321 | SINE (AluYa5) | 1 |
chr19:24 243 583 | 69 | LTR (MER11B) | 1 |
chr19:39 905 477 | 312 | SINE (AluSx) | 1 |
chr19:40 648 243 | 97 | Retroposon (SVA_F) | 1 |
chr19:40 920 013 | 65 | LTR (MER11A) | 1 |
chr19:47 926 362 | 317 | LINE (L1PREC2) | 1 |
chr19:50 585 457 | 100 | SINE (AluJb) | 1 |
chr19:52 720 518 | 73 | Retroposon (SVA_A) | 1 |
chr20:306 267 | 174 | SINE (AluJb) | 1 |
chr20:3 018 857 | 47 | Retroposon (SVA_F) | 1 |
chr20:4 033 198 | 215 | Retroposon (SVA_F) | 1 |
chr20:5 040 476 | 283 | SINE (AluY) | 1 |
chr20:6 665 191 | 64 | DNA (MER33) | 1 |
chr20:15 152 472 | 41 | LTR (HERVH-int) | 1 |
chr20:16 134 623 | 36 | LTR (MER41A) | 1 |
chr20:18 689 894 | 175 | SINE (AluJb) | 1 |
chr20:23 765 577 | 78 | LINE (L1PA15-16) | 1 |
chr20:28 790 008 | 45 | LINE (L1P1) | 1 |
chr20:29 307 454 | 181 | SINE (AluSq) | 1 |
chr20:29 387 580 | 72 | LINE (L1M1) | 1 |
chr20:30 406 410 | 101 | Retroposon (SVA_D) | 1 |
chr20:31 470 609 | 47 | Retroposon (SVA_F) | 1 |
chr20:32 176 933 | 175 | Retroposon (SVA_F) | 1 |
chr20:35 564 380 | 148 | SINE (AluSg) | 1 |
chr20:44 297 116 | 37 | SINE (AluSp) | 1 |
chr20:45 645 644 | 225 | Retroposon (SVA_F) | 1 |
chr20:50 366 198 | 36 | SINE (Alu) | 1 |
chr20:50 685 661 | 314 | SINE (AluY) | 1 |
chr20:51 953 822 | 316 | SINE (AluYa5) | 1 |
chr20:54 108 682 | 313 | SINE (AluYa5) | 1 |
chr20:55 145 299 | 315 | SINE (AluYa5) | 1 |
chr21:5 216 449 | 222 | LINE (L1M3) | 1 |
chr21:10 508 068 | 56 | LINE (L1M3) | 1 |
chr21:15 089 462 | 276 | SINE (AluYa5) | 1 |
chr21:20 142 805 | 314 | SINE (AluY) | 1 |
chr21:24 981 909 | 324 | SINE (AluY) | 1 |
chr21:32 482 930 | 67 | SINE (AluJb) | 1 |
chr21:35 865 629 | 323 | SINE (AluYa5) | 1 |
chr21:37 685 537 | 314 | SINE (AluYa5) | 1 |
chr21:42 965 782 | 321 | SINE (AluYb8) | 1 |
chr21:43 823 144 | 69 | LTR (MLT1D) | 1 |
chr21:44 468 497 | 134 | SINE (AluSz) | 1 |
chr21:44 825 056 | 126 | Retroposon (SVA_F) | 1 |
chr22:11 860 399 | 311 | SINE (AluYa5) | 1 |
chr22:15 830 536 | 136 | SINE (AluSx) | 1 |
chr22:17 567 653 | 357 | SINE (AluYb8) | 1 |
chr22:19 373 922 | 126 | SINE (AluYa5) | 1 |
chr22:22 644 845 | 318 | SINE (AluSx) | 1 |
chr22:23 530 480 | 320 | SINE (AluYb8) | 1 |
chr22:25 277 728 | 48 | Retroposon (SVA_F) | 1 |
chr22:25 345 879 | 175 | SINE (AluSx) | 1 |
chr22:30 597 422 | 160 | LTR (LTR12C) | 1 |
chr22:31 024 654 | 334 | SINE (AluY) | 1 |
chr22:37 220 830 | 42 | LTR (THE1C) | 1 |
chr22:37 786 956 | 124 | Retroposon (SVA_F) | 1 |
chr22:40 501 143 | 130 | Retroposon (SVA_F) | 1 |
chr22:40 744 913 | 175 | Retroposon (SVA_F) | 1 |
chr22:41 552 575 | 39 | SINE (AluJb) | 1 |
chr22:46 509 527 | 45 | DNA (MER20) | 1 |
chrX:881 180 | 133 | SINE (AluJb) | 1 |
chrX:1 057 561 | 80 | SINE (AluSx) | 1 |
chrX:1 390 753 | 119 | SINE (FLAM_C) | 1 |
chrX:3 600 520 | 38 | LINE (L1MB1) | 1 |
chrX:8 978 447 | 89 | LINE (L1P4) | 1 |
chrX:12 963 684 | 48 | Retroposon (SVA_F) | 1 |
chrX:24 709 090 | 129 | Retroposon (SVA_F) | 1 |
chrX:29 333 929 | 49 | Retroposon (SVA_F) | 1 |
chrX:34 249 205 | 395 | LINE (L1P1) | 1 |
chrX:35 009 970 | 322 | SINE (AluYi6) | 1 |
chrX:42 285 660 | 398 | Retroposon (SVA_E) | 1 |
chrX:45 040 274 | 164 | Retroposon (SVA_F) | 1 |
chrX:52 729 421 | 98 | LINE (L1PA4) | 1 |
chrX:53 772 507 | 127 | Retroposon (SVA_F) | 1 |
chrX:65 457 297 | 346 | Retroposon (SVA_F) | 1 |
chrX:66 519 345 | 52 | LINE (L1PREC2) | 1 |
chrX:68 326 721 | 624 | Retroposon (SVA_F) | 1 |
chrX:70 350 008 | 116 | Retroposon (SVA_A) | 1 |
chrX:75 334 747 | 38 | Retroposon (SVA_B) | 1 |
chrX:76 218 142 | 599 | Retroposon (SVA_F) | 1 |
chrX:77 354 184 | 320 | SINE (AluYa5) | 1 |
chrX:78 265 516 | 201 | Retroposon (SVA_F) | 1 |
chrX:80 215 124 | 116 | Retroposon (SVA_A) | 1 |
chrX:88 864 162 | 47 | LTR (LTR12D) | 1 |
chrX:91 279 137 | 242 | SINE (AluYa5) | 1 |
chrX:97 200 437 | 32 | LINE (L1P3) | 1 |
chrX:104 079 600 | 37 | LINE (L1P3) | 1 |
chrX:107 501 516 | 133 | SINE (AluYb8) | 1 |
chrX:115 436 029 | 295 | SINE (AluY) | 1 |
chrX:124 128 746 | 222 | Retroposon (SVA_F) | 1 |
chrX:128 450 745 | 54 | LTR (THE1C) | 1 |
chrX:137 267 661 | 334 | SINE (AluY) | 1 |
chrX:137 875 124 | 299 | SINE (AluY) | 1 |
chrX:138 269 887 | 51 | LTR (LTR7) | 1 |
chrX:146 808 266 | 319 | SINE (AluYb8) | 1 |
chrX:152 833 245 | 315 | SINE (AluY) | 1 |
chrY:11 349 044 | 100 | SINE (AluSq2) | 1 |
chrY:11 384 811 | 209 | SINE (AluYa5) | 1 |
chrY:56 867 597 | 132 | SINE (AluSc) | 1 |
Allele frequency is shown for insertions for each chromosome. Each dot marks a different insertion.
This is the classification of TEs by class (I or II), family (e.g., SINE), subfamily (e.g., Alu) and name (e.g., AluY). SVA, Alu and L1 elements have their own table on the Class I section.
Repeat | Repeat | Unique | Total | Total |
|---|---|---|---|---|
DNA | hAT | 4 | 8 | 8 |
TcMar | 7 | 14 | 14 | |
LINE | CR1 | 1 | 2 | 2 |
L1 | 278 | 544 | 536 | |
L2 | 11 | 22 | 21 | |
LTR | ERV1 | 116 | 221 | 210 |
ERVK | 16 | 30 | 30 | |
ERVL | 37 | 74 | 74 | |
Retroposon | SVA | 444 | 866 | 804 |
SINE | Alu | 1 549 | 3 073 | 3 061 |
MIR | 5 | 10 | 10 | |
Total | - | 2 468 | 4 864 | 4 770 |
Name | Unique | Total | Total |
|---|---|---|---|
SVA A | 53 | 103 | 95 |
SVA B | 14 | 27 | 25 |
SVA C | 15 | 30 | 26 |
SVA D | 15 | 30 | 26 |
SVA E | 66 | 130 | 124 |
SVA F | 276 | 536 | 498 |
SVA F1 | 5 | 10 | 10 |
Total | 444 | 866 | 804 |
Name | Unique | Total | Total |
|---|---|---|---|
Alu | 8 | 15 | 15 |
AluJb | 36 | 71 | 70 |
AluJo | 3 | 6 | 6 |
AluJr4 | 3 | 6 | 6 |
AluSc | 5 | 9 | 9 |
AluSc8 | 5 | 10 | 9 |
AluSg | 10 | 20 | 20 |
AluSg4 | 1 | 1 | 1 |
AluSg7 | 1 | 2 | 2 |
AluSp | 9 | 18 | 18 |
AluSq | 11 | 22 | 22 |
AluSq2 | 3 | 6 | 6 |
AluSx | 75 | 145 | 144 |
AluSx3 | 4 | 8 | 8 |
AluSx4 | 6 | 11 | 10 |
AluSz | 8 | 16 | 16 |
AluSz6 | 4 | 8 | 7 |
AluY | 316 | 627 | 623 |
AluYa5 | 516 | 1 029 | 1 029 |
AluYa8 | 6 | 12 | 12 |
AluYb8 | 270 | 538 | 537 |
AluYb9 | 38 | 76 | 76 |
AluYc | 21 | 41 | 40 |
AluYd8 | 11 | 22 | 22 |
AluYe5 | 45 | 89 | 89 |
AluYg6 | 34 | 67 | 67 |
AluYh3 | 1 | 1 | 1 |
AluYh7 | 7 | 14 | 14 |
AluYi6 | 11 | 22 | 22 |
AluYi6 4d | 2 | 4 | 4 |
AluYj4 | 3 | 6 | 6 |
AluYk11 | 7 | 14 | 14 |
AluYk12 | 5 | 10 | 10 |
AluYk2 | 49 | 98 | 98 |
AluYk3 | 2 | 4 | 4 |
AluYk4 | 2 | 4 | 4 |
AluYm1 | 2 | 4 | 4 |
FLAM C | 5 | 9 | 9 |
FRAM | 4 | 8 | 7 |
Total | 1 549 | 3 073 | 3 061 |
Name | Unique | Total | Total |
|---|---|---|---|
L1HS | 109 | 214 | 213 |
L1M | 2 | 4 | 4 |
L1M1 | 7 | 14 | 14 |
L1M2 | 2 | 4 | 4 |
L1M2a1 | 1 | 2 | 2 |
L1M3 | 7 | 14 | 13 |
L1M4 | 5 | 8 | 8 |
L1M4b | 1 | 2 | 2 |
L1M4c | 1 | 2 | 2 |
L1M5 | 6 | 11 | 11 |
L1MA6 | 1 | 2 | 1 |
L1MB3 | 2 | 4 | 4 |
L1MB5 | 2 | 3 | 3 |
L1MB8 | 1 | 2 | 2 |
L1MC | 2 | 4 | 4 |
L1MC3 | 1 | 2 | 2 |
L1MC4 | 2 | 4 | 4 |
L1MC4a | 2 | 4 | 4 |
L1MC5 | 2 | 4 | 4 |
L1MCa | 2 | 4 | 4 |
L1MD | 3 | 6 | 6 |
L1MD3 | 2 | 4 | 4 |
L1ME1 | 1 | 2 | 2 |
L1ME3A | 1 | 2 | 2 |
L1MEc | 1 | 2 | 2 |
L1MEd | 1 | 2 | 2 |
L1MEf | 1 | 2 | 2 |
L1MEg | 1 | 2 | 2 |
L1P1 | 28 | 55 | 54 |
L1P2 | 9 | 17 | 17 |
L1P3 | 10 | 20 | 18 |
L1P3b | 1 | 2 | 2 |
L1P4 | 9 | 18 | 17 |
L1P5 | 4 | 7 | 7 |
L1PA10 | 3 | 5 | 5 |
L1PA11 | 1 | 2 | 2 |
L1PA12 | 2 | 4 | 4 |
L1PA13 | 1 | 2 | 2 |
L1PA15-16 | 1 | 2 | 2 |
L1PA16 | 2 | 4 | 4 |
L1PA17 | 1 | 2 | 1 |
L1PA2 | 8 | 16 | 16 |
L1PA3 | 3 | 6 | 6 |
L1PA4 | 4 | 8 | 8 |
L1PA6 | 2 | 4 | 4 |
L1PA7 | 2 | 4 | 4 |
L1PA8 | 1 | 2 | 2 |
L1PA8A | 2 | 4 | 4 |
L1PB | 2 | 4 | 4 |
L1PB1 | 1 | 2 | 2 |
L1PBa | 2 | 4 | 4 |
L1PBa1 | 2 | 4 | 4 |
L1PBb | 2 | 4 | 4 |
L1PREC2 | 6 | 12 | 12 |
Total | 278 | 544 | 536 |
Position | Length | Type | Gene | Annotation | Occurrences |
|---|---|---|---|---|---|
chr1:1 546 888 | 121 | SINE (Alu) | SSU72 | Promoter | 2 |
chr1:1 546 888 | 121 | SINE (Alu) | SSU72 | Intron | 2 |
chr1:1 885 904 | 328 | SINE (Alu) | GNB1 | Intron | 2 |
chr1:1 993 703 | 146 | SINE (Alu) | CFAP74 | Intron | 2 |
chr1:7 803 432 | 181 | SINE (Alu) | PER3 | Intron | 2 |
chr1:8 386 566 | 313 | SINE (Alu) | RERE | Intron | 2 |
chr1:8 502 128 | 581 | Retroposon (SVA) | RERE | Intron | 2 |
chr1:9 170 364 | 317 | SINE (Alu) | MIR34AHG | Intron | 2 |
chr1:9 968 550 | 140 | SINE (Alu) | NMNAT1 | Intron | 2 |
chr1:15 163 622 | 135 | SINE (Alu) | TMEM51 | Intron | 2 |
chr1:16 424 203 | 134 | SINE (Alu) | SPATA21 | Intron | 2 |
chr1:16 868 227 | 314 | SINE (Alu) | CROCC | Intron | 2 |
chr1:21 166 094 | 316 | SINE (Alu) | EIF4G3 | Intron | 2 |
chr1:26 904 034 | 320 | SINE (Alu) | NUDC | Intron | 2 |
chr1:28 410 097 | 124 | SINE (Alu) | PHACTR4 | Intron | 2 |
chr1:29 100 312 | 322 | SINE (Alu) | EPB41 | Intron | 2 |
chr1:33 052 506 | 100 | Retroposon (SVA) | AK2 | Intron | 2 |
chr1:37 837 431 | 337 | SINE (Alu) | MTF1 | Intron | 2 |
chr1:37 967 098 | 317 | SINE (Alu) | SF3A3 | Intron | 2 |
chr1:38 485 066 | 75 | SINE (Alu) | LINC01685 | Intron | 2 |
chr1:39 234 642 | 517 | Retroposon (SVA) | MACF1 | Intron | 2 |
chr1:43 743 238 | 307 | SINE (Alu) | KDM4A | Intron | 2 |
chr1:43 780 660 | 2 612 | Retroposon (SVA) | KDM4A | Intron | 2 |
chr1:44 876 567 | 399 | Retroposon (SVA) | EIF2B3 | Promoter | 2 |
chr1:44 876 567 | 399 | Retroposon (SVA) | EIF2B3 | Intron | 2 |
chr1:45 330 021 | 326 | SINE (Alu) | MUTYH | Intron | 2 |
chr1:45 497 642 | 654 | Retroposon (SVA) | CCDC163 | Intron | 2 |
chr1:46 213 357 | 335 | SINE (Alu) | LURAP1 | Intron | 2 |
chr1:50 446 975 | 333 | SINE (Alu) | FAF1 | Intron | 2 |
chr1:51 711 458 | 355 | Retroposon (SVA) | OSBPL9 | Intron | 2 |
chr1:52 869 965 | 98 | Retroposon (SVA) | ZYG11A | Intron | 2 |
chr1:54 561 779 | 180 | Retroposon (SVA) | ACOT11 | Intron | 2 |
chr1:54 561 916 | 49 | Retroposon (SVA) | ACOT11 | Intron | 1 |
chr1:57 606 184 | 211 | SINE (Alu) | DAB1 | Intron | 2 |
chr1:59 125 792 | 322 | SINE (Alu) | LINC01358 | Intron | 2 |
chr1:59 406 189 | 319 | SINE (Alu) | FGGY | Intron | 2 |
chr1:63 473 989 | 117 | Retroposon (SVA) | ITGB3BP | Intron | 2 |
chr1:64 492 377 | 346 | SINE (Alu) | CACHD1 | Intron | 2 |
chr1:64 881 268 | 333 | SINE (Alu) | JAK1 | Intron | 2 |
chr1:65 590 242 | 315 | SINE (Alu) | LEPR | Intron | 2 |
chr1:69 625 372 | 325 | SINE (Alu) | LRRC7 | Intron | 2 |
chr1:69 625 526 | 325 | SINE (Alu) | LRRC7 | Intron | 2 |
chr1:74 727 204 | 3 708 | LINE (L1) | CRYZ | Intron | 2 |
chr1:76 390 944 | 311 | SINE (Alu) | ST6GALNAC3 | Intron | 2 |
chr1:77 003 278 | 334 | SINE (Alu) | ST6GALNAC5 | Intron | 2 |
chr1:77 112 226 | 328 | SINE (Alu) | PIGK | Intron | 2 |
chr1:77 168 628 | 316 | SINE (Alu) | PIGK | Intron | 2 |
chr1:79 116 389 | 307 | SINE (Alu) | ADGRL4 | Intron | 2 |
chr1:81 846 355 | 322 | SINE (Alu) | ADGRL2 | Intron | 2 |
chr1:83 144 050 | 1 742 | LINE (L1) | LINC01362 | Intron | 2 |
chr1:89 905 000 | 268 | SINE (Alu) | LRRC8D | Intron | 2 |
chr1:92 701 961 | 321 | SINE (Alu) | EVI5 | Intron | 2 |
chr1:94 877 128 | 299 | SINE (Alu) | SLC44A3 | Intron | 2 |
chr1:100 086 086 | 314 | SINE (Alu) | SASS6 | Intron | 2 |
chr1:107 599 843 | 308 | SINE (Alu) | VAV3 | Intron | 2 |
chr1:110 005 956 | 218 | SINE (Alu) | AHCYL1 | Intron | 2 |
chr1:111 581 052 | 320 | SINE (Alu) | RAP1A | Intron | 2 |
chr1:112 193 371 | 326 | SINE (Alu) | LINC02884 | Intron | 2 |
chr1:112 449 371 | 314 | SINE (Alu) | CTTNBP2NL | Intron | 2 |
chr1:114 658 770 | 304 | SINE (Alu) | DENND2C | Intron | 2 |
chr1:117 429 536 | 99 | Retroposon (SVA) | MAN1A2 | Intron | 1 |
chr1:117 430 034 | 174 | Retroposon (SVA) | MAN1A2 | Intron | 2 |
chr1:147 488 600 | 103 | SINE (MIR) | LINC00624 | Intron | 2 |
chr1:147 653 127 | 306 | SINE (Alu) | ACP6 | Intron | 2 |
chr1:147 949 446 | 117 | Retroposon (SVA) | GPR89B | Intron | 2 |
chr1:151 769 292 | 91 | Retroposon (SVA) | OAZ3 | Intron | 2 |
chr1:155 700 905 | 350 | Retroposon (SVA) | DAP3 | Intron | 2 |
chr1:155 954 588 | 320 | SINE (Alu) | ARHGEF2 | Intron | 2 |
chr1:156 327 929 | 89 | Retroposon (SVA) | CCT3 | Intron | 2 |
chr1:156 328 044 | 142 | Retroposon (SVA) | CCT3 | Intron | 1 |
chr1:162 791 517 | 317 | SINE (Alu) | HSD17B7 | Intron | 2 |
chr1:163 344 640 | 327 | SINE (Alu) | NUF2 | Intron | 2 |
chr1:165 690 066 | 272 | SINE (Alu) | ALDH9A1 | Intron | 2 |
chr1:167 536 856 | 234 | SINE (Alu) | LOC107985224 | Intron | 2 |
chr1:169 993 600 | 163 | SINE (Alu) | KIFAP3 | Intron | 2 |
chr1:170 682 342 | 96 | SINE (Alu) | PRRX1 | Intron | 2 |
chr1:172 571 921 | 386 | Retroposon (SVA) | SUCO | Intron | 1 |
chr1:179 522 821 | 353 | SINE (Alu) | AXDND1 | Intron | 2 |
chr1:180 701 807 | 281 | LINE (L1) | XPR1 | Intron | 2 |
chr1:182 451 704 | 323 | SINE (Alu) | RGSL1 | Intron | 2 |
chr1:191 848 294 | 318 | SINE (Alu) | LINC02770 | Intron | 2 |
chr1:192 857 349 | 77 | Retroposon (SVA) | LOC105371665 | Intron | 2 |
chr1:192 857 702 | 175 | Retroposon (SVA) | LOC105371665 | Intron | 2 |
chr1:196 792 226 | 324 | SINE (Alu) | CFH | Intron | 2 |
chr1:198 846 183 | 284 | SINE (Alu) | MIR181A1HG | Intron | 2 |
chr1:204 269 326 | 317 | SINE (Alu) | PLEKHA6 | Intron | 2 |
chr1:210 745 043 | 121 | SINE (Alu) | KCNH1 | Intron | 2 |
chr1:212 592 491 | 315 | SINE (Alu) | ATF3 | Intron | 2 |
chr1:215 111 930 | 317 | SINE (Alu) | KCNK2 | Intron | 2 |
chr1:216 898 707 | 330 | SINE (Alu) | ESRRG | Intron | 2 |
chr1:217 828 482 | 324 | SINE (Alu) | SPATA17 | Intron | 2 |
chr1:219 010 830 | 100 | LINE (L1) | LYPLAL1-DT | Intron | 2 |
chr1:220 781 002 | 318 | SINE (Alu) | MTARC2 | Intron | 2 |
chr1:222 697 340 | 328 | SINE (Alu) | AIDA | Intron | 2 |
chr1:223 123 062 | 330 | SINE (Alu) | TLR5 | Intron | 2 |
chr1:227 275 238 | 323 | SINE (Alu) | CDC42BPA | Intron | 2 |
chr1:227 314 751 | 134 | SINE (Alu) | CDC42BPA | Intron | 2 |
chr1:227 414 560 | 315 | SINE (Alu) | LINC01641 | Intron | 2 |
chr1:230 949 403 | 304 | SINE (Alu) | TTC13 | Intron | 2 |
chr1:233 206 358 | 314 | SINE (Alu) | PCNX2 | Intron | 2 |
chr1:235 635 571 | 168 | LTR (ERVL) | GNG4 | Intron | 2 |
chr1:236 374 894 | 2 105 | Retroposon (SVA) | EDARADD | Intron | 2 |
chr1:236 387 105 | 275 | Retroposon (SVA) | EDARADD | Intron | 2 |
chr1:237 286 555 | 204 | LINE (L1) | RYR2 | Intron | 2 |
chr1:240 060 352 | 54 | SINE (Alu) | FMN2 | Intron | 2 |
chr1:241 326 644 | 326 | SINE (Alu) | RGS7 | Intron | 2 |
chr1:243 214 577 | 324 | SINE (Alu) | CEP170 | Intron | 2 |
chr1:245 826 009 | 323 | SINE (Alu) | SMYD3 | Intron | 2 |
chr1:246 402 366 | 165 | SINE (Alu) | SMYD3 | Intron | 2 |
chr1:246 429 027 | 318 | SINE (Alu) | SMYD3 | Intron | 2 |
chr1:246 652 781 | 133 | SINE (Alu) | CNST | Intron | 2 |
chr1:248 911 737 | 126 | Retroposon (SVA) | PGBD2 | Intron | 2 |
chr1:434 606 | 77 | LINE (L1) | LOC112268260 | Intron | 1 |
chr1:710 578 | 318 | SINE (Alu) | OR4F16 | Intron | 2 |
chr2:1 143 706 | 282 | SINE (Alu) | SNTG2 | Intron | 2 |
chr2:1 467 941 | 331 | SINE (Alu) | TPO | Intron | 2 |
chr2:2 295 544 | 171 | LTR (ERV1) | MYT1L | Intron | 2 |
chr2:10 685 915 | 158 | LINE (L2) | NOL10 | Intron | 2 |
chr2:11 213 564 | 312 | SINE (Alu) | ROCK2 | Intron | 2 |
chr2:11 286 233 | 325 | SINE (Alu) | ROCK2 | Intron | 2 |
chr2:15 611 912 | 95 | Retroposon (SVA) | DDX1 | Intron | 2 |
chr2:21 573 937 | 297 | SINE (Alu) | LOC105374320 | Intron | 2 |
chr2:27 539 841 | 492 | Retroposon (SVA) | C2orf16 | Intron | 2 |
chr2:27 831 210 | 323 | SINE (Alu) | BABAM2 | Intron | 2 |
chr2:31 336 819 | 318 | SINE (Alu) | XDH | Intron | 2 |
chr2:32 140 771 | 322 | SINE (Alu) | SPAST | Intron | 2 |
chr2:34 030 310 | 317 | SINE (Alu) | LINC01317 | Intron | 2 |
chr2:36 777 087 | 305 | SINE (Alu) | VIT | Intron | 2 |
chr2:39 079 152 | 61 | LINE (L1) | SOS1 | Intron | 2 |
chr2:39 088 182 | 316 | SINE (Alu) | SOS1 | Intron | 2 |
chr2:40 386 532 | 329 | SINE (Alu) | SLC8A1 | Intron | 2 |
chr2:44 588 991 | 260 | Retroposon (SVA) | CAMKMT | Intron | 2 |
chr2:44 598 695 | 317 | SINE (Alu) | CAMKMT | Intron | 2 |
chr2:46 701 810 | 291 | SINE (Alu) | LINC01118 | Intron | 2 |
chr2:47 092 140 | 329 | SINE (Alu) | STPG4 | Intron | 2 |
chr2:47 582 848 | 2 883 | Retroposon (SVA) | MSH2 | Intron | 2 |
chr2:47 956 016 | 134 | SINE (Alu) | LOC105374591 | Intron | 2 |
chr2:50 375 489 | 328 | SINE (Alu) | NRXN1 | Intron | 2 |
chr2:51 768 829 | 311 | SINE (Alu) | LOC730100 | Intron | 2 |
chr2:54 889 449 | 313 | SINE (Alu) | EML6 | Intron | 2 |
chr2:56 146 383 | 319 | SINE (Alu) | LOC105374690 | Intron | 2 |
chr2:59 647 122 | 242 | SINE (Alu) | LOC105374754 | Intron | 2 |
chr2:60 418 626 | 63 | LTR (ERV1) | MIR4432HG | Intron | 2 |
chr2:63 552 086 | 328 | SINE (Alu) | WDPCP | Intron | 2 |
chr2:64 936 632 | 315 | SINE (Alu) | LINC02245 | Intron | 2 |
chr2:65 106 650 | 306 | SINE (Alu) | RAB1A | Intron | 2 |
chr2:65 600 662 | 534 | Retroposon (SVA) | LINC02934 | Intron | 2 |
chr2:65 600 671 | 1 339 | Retroposon (SVA) | LINC02934 | Intron | 2 |
chr2:65 600 856 | 97 | Retroposon (SVA) | LINC02934 | Intron | 2 |
chr2:66 431 844 | 323 | SINE (Alu) | MEIS1-AS3 | Intron | 2 |
chr2:69 517 524 | 325 | SINE (Alu) | AAK1 | Intron | 2 |
chr2:73 898 351 | 318 | SINE (Alu) | ACTG2 | Intron | 2 |
chr2:74 061 581 | 351 | Retroposon (SVA) | TET3 | Intron | 2 |
chr2:74 776 087 | 348 | SINE (Alu) | LOC102724497 | Intron | 2 |
chr2:75 160 773 | 315 | SINE (Alu) | LOC105374811 | Intron | 2 |
chr2:80 541 884 | 270 | SINE (Alu) | CTNNA2 | Intron | 2 |
chr2:87 180 576 | 492 | LINE (L1) | LOC102724642 | Intron | 2 |
chr2:95 857 174 | 329 | SINE (Alu) | ANKRD36C | Intron | 2 |
chr2:97 965 682 | 304 | SINE (Alu) | TMEM131 | Intron | 2 |
chr2:104 078 052 | 74 | LTR (ERV1) | LINC01965 | Intron | 2 |
chr2:107 308 150 | 272 | SINE (Alu) | LINC01789 | Intron | 2 |
chr2:111 689 844 | 326 | SINE (Alu) | MIR4435-2HG | Intron | 2 |
chr2:111 958 964 | 326 | SINE (Alu) | MERTK | Intron | 2 |
chr2:113 348 853 | 318 | SINE (Alu) | LINC02966 | Intron | 2 |
chr2:117 871 796 | 101 | LINE (L1) | LOC101929908 | Intron | 2 |
chr2:118 042 423 | 74 | LINE (L1) | LOC102723413 | Intron | 2 |
chr2:119 843 892 | 476 | Retroposon (SVA) | PTPN4 | Intron | 1 |
chr2:119 843 905 | 646 | Retroposon (SVA) | PTPN4 | Intron | 1 |
chr2:119 844 104 | 224 | Retroposon (SVA) | PTPN4 | Intron | 2 |
chr2:122 573 068 | 317 | SINE (Alu) | LOC105373595 | Intron | 2 |
chr2:127 881 317 | 322 | SINE (Alu) | AMMECR1L | Intron | 2 |
chr2:127 981 351 | 121 | LTR (ERV1) | SAP130 | Intron | 2 |
chr2:130 095 311 | 6 054 | LINE (L1) | POTEF | Intron | 2 |
chr2:131 765 910 | 259 | SINE (Alu) | C2orf27A | Intron | 2 |
chr2:137 502 221 | 304 | SINE (Alu) | THSD7B | Intron | 2 |
chr2:141 356 579 | 332 | SINE (Alu) | LRP1B | Intron | 2 |
chr2:147 892 493 | 298 | SINE (Alu) | ACVR2A | Intron | 2 |
chr2:149 907 736 | 327 | SINE (Alu) | MMADHC-DT | Intron | 2 |
chr2:152 391 750 | 325 | SINE (Alu) | FMNL2 | Intron | 2 |
chr2:159 251 110 | 156 | SINE (Alu) | WDSUB1 | Intron | 2 |
chr2:159 519 808 | 159 | SINE (Alu) | BAZ2B | Intron | 2 |
chr2:162 822 105 | 310 | SINE (Alu) | KCNH7 | Intron | 2 |
chr2:171 866 626 | 421 | Retroposon (SVA) | SLC25A12 | Intron | 2 |
chr2:174 871 203 | 318 | SINE (Alu) | CHN1 | Intron | 2 |
chr2:177 453 984 | 332 | SINE (Alu) | AGPS | Intron | 2 |
chr2:177 486 725 | 339 | SINE (Alu) | AGPS | Intron | 2 |
chr2:181 016 002 | 310 | SINE (Alu) | UBE2E3 | Intron | 2 |
chr2:181 397 456 | 307 | SINE (Alu) | LINC01934 | Intron | 2 |
chr2:184 896 828 | 322 | SINE (Alu) | ZNF804A | Intron | 2 |
chr2:188 298 290 | 297 | SINE (Alu) | GULP1 | Intron | 2 |
chr2:189 094 694 | 310 | SINE (Alu) | COL5A2 | Intron | 2 |
chr2:190 430 798 | 95 | Retroposon (SVA) | MFSD6 | Intron | 1 |
chr2:191 398 198 | 300 | Retroposon (SVA) | MYO1B | Intron | 2 |
chr2:192 131 159 | 114 | LTR (ERV1) | TMEFF2 | Intron | 1 |
chr2:197 922 671 | 126 | Retroposon (SVA) | PLCL1 | Intron | 1 |
chr2:200 773 343 | 968 | LINE (L1) | AOX3P-AOX2P | Intron | 2 |
chr2:201 766 720 | 319 | SINE (Alu) | ALS2 | Intron | 2 |
chr2:201 777 260 | 325 | SINE (Alu) | ALS2 | Intron | 2 |
chr2:207 112 163 | 322 | SINE (Alu) | KLF7 | Intron | 2 |
chr2:207 607 676 | 315 | SINE (Alu) | METTL21A | Intron | 2 |
chr2:212 060 586 | 323 | SINE (Alu) | ERBB4 | Intron | 2 |
chr2:213 112 341 | 342 | SINE (Alu) | IKZF2 | Intron | 2 |
chr2:214 336 906 | 323 | SINE (Alu) | SPAG16 | Intron | 2 |
chr2:214 835 480 | 426 | Retroposon (SVA) | SNHG31 | Intron | 1 |
chr2:215 683 694 | 326 | SINE (Alu) | LOC102724861 | Intron | 2 |
chr2:217 316 033 | 319 | SINE (Alu) | DIRC3-AS1 | Intron | 2 |
chr2:217 400 356 | 318 | SINE (Alu) | DIRC3 | Intron | 2 |
chr2:218 711 869 | 326 | SINE (Alu) | TTLL4 | Intron | 2 |
chr2:228 665 921 | 50 | LINE (L1) | LINC01807 | Intron | 2 |
chr2:232 246 907 | 127 | LINE (L1) | DIS3L2 | Intron | 2 |
chr2:232 981 165 | 310 | SINE (Alu) | NGEF | Intron | 2 |
chr2:233 724 125 | 50 | Retroposon (SVA) | UGT1A8 | Intron | 2 |
chr3:2 129 412 | 333 | SINE (Alu) | CNTN4 | Intron | 2 |
chr3:2 772 339 | 327 | SINE (Alu) | CNTN4 | Intron | 2 |
chr3:2 920 309 | 317 | SINE (Alu) | CNTN4 | Intron | 2 |
chr3:4 163 465 | 316 | SINE (Alu) | SUMF1 | Intron | 2 |
chr3:7 088 685 | 326 | SINE (Alu) | GRM7 | Intron | 2 |
chr3:7 091 700 | 330 | SINE (Alu) | GRM7 | Intron | 2 |
chr3:7 128 489 | 309 | SINE (Alu) | GRM7 | Intron | 2 |
chr3:8 440 233 | 331 | Retroposon (SVA) | LOC101927394 | Intron | 2 |
chr3:8 440 261 | 76 | Retroposon (SVA) | LOC101927394 | Intron | 2 |
chr3:10 070 475 | 212 | Retroposon (SVA) | FANCD2 | Intron | 2 |
chr3:10 241 289 | 146 | SINE (Alu) | IRAK2 | Intron | 2 |
chr3:11 487 506 | 529 | Retroposon (SVA) | ATG7 | Intron | 2 |
chr3:11 487 563 | 825 | Retroposon (SVA) | ATG7 | Intron | 2 |
chr3:12 095 544 | 323 | SINE (Alu) | SYN2 | Intron | 2 |
chr3:15 742 687 | 749 | Retroposon (SVA) | ANKRD28 | Intron | 2 |
chr3:16 980 137 | 740 | Retroposon (SVA) | PLCL2 | Intron | 2 |
chr3:25 236 955 | 323 | SINE (Alu) | RARB | Intron | 2 |
chr3:25 249 849 | 71 | LINE (L1) | RARB | Intron | 2 |
chr3:28 798 671 | 330 | SINE (Alu) | ZCWPW2 | Intron | 2 |
chr3:29 472 992 | 49 | LTR (ERV1) | ZCWPW2 | Intron | 2 |
chr3:29 473 150 | 159 | LTR (ERV1) | ZCWPW2 | Intron | 2 |
chr3:31 839 889 | 326 | SINE (Alu) | OSBPL10 | Intron | 2 |
chr3:32 002 688 | 94 | LTR (ERV1) | OSBPL10 | Intron | 2 |
chr3:32 397 295 | 251 | SINE (Alu) | CMTM7 | Intron | 2 |
chr3:37 562 939 | 320 | SINE (Alu) | ITGA9 | Intron | 2 |
chr3:37 879 053 | 341 | SINE (Alu) | CTDSPL | Intron | 2 |
chr3:38 358 205 | 289 | SINE (Alu) | XYLB | Intron | 2 |
chr3:40 200 116 | 321 | SINE (Alu) | MYRIP | Intron | 2 |
chr3:41 306 196 | 61 | Retroposon (SVA) | ULK4 | Intron | 2 |
chr3:44 298 799 | 306 | SINE (Alu) | TOPAZ1 | Intron | 2 |
chr3:45 501 159 | 317 | SINE (Alu) | LARS2 | Intron | 2 |
chr3:45 650 999 | 329 | SINE (Alu) | LIMD1 | Intron | 2 |
chr3:46 494 947 | 323 | Retroposon (SVA) | RTP3 | Intron | 2 |
chr3:46 620 351 | 321 | SINE (Alu) | FAM240A | Intron | 2 |
chr3:47 741 368 | 318 | SINE (Alu) | SMARCC1 | Intron | 2 |
chr3:48 330 822 | 324 | SINE (Alu) | SPINK8 | Intron | 2 |
chr3:48 708 596 | 324 | SINE (Alu) | IP6K2 | Intron | 2 |
chr3:50 025 589 | 268 | SINE (Alu) | RBM6 | Intron | 2 |
chr3:50 084 780 | 77 | Retroposon (SVA) | RBM6 | Intron | 2 |
chr3:50 841 727 | 344 | SINE (Alu) | DOCK3 | Intron | 2 |
chr3:51 249 675 | 126 | Retroposon (SVA) | DOCK3 | Intron | 2 |
chr3:53 465 970 | 334 | SINE (Alu) | CACNA1D | Intron | 2 |
chr3:56 584 270 | 79 | Retroposon (SVA) | CCDC66 | Intron | 2 |
chr3:57 448 751 | 487 | LTR (ERV1) | DNAH12 | Intron | 2 |
chr3:57 578 464 | 310 | SINE (Alu) | ARF4 | Intron | 2 |
chr3:59 908 834 | 108 | SINE (Alu) | FHIT | Intron | 2 |
chr3:61 671 741 | 281 | Retroposon (SVA) | PTPRG | Intron | 1 |
chr3:61 671 741 | 177 | Retroposon (SVA) | PTPRG | Intron | 1 |
chr3:63 555 273 | 312 | SINE (Alu) | SYNPR | Intron | 2 |
chr3:79 619 091 | 52 | LTR (ERV1) | ROBO1 | Intron | 2 |
chr3:79 762 475 | 330 | SINE (Alu) | ROBO1 | Intron | 2 |
chr3:85 527 417 | 6 052 | LINE (L1) | CADM2 | Intron | 2 |
chr3:88 428 991 | 287 | SINE (Alu) | CSNKA2IP | Intron | 2 |
chr3:98 836 816 | 77 | Retroposon (SVA) | DCBLD2 | Intron | 2 |
chr3:99 007 919 | 312 | SINE (Alu) | LOC105374002 | Intron | 2 |
chr3:99 936 539 | 324 | SINE (Alu) | CMSS1 | Intron | 2 |
chr3:100 691 697 | 327 | SINE (Alu) | ADGRG7 | Intron | 2 |
chr3:101 439 979 | 731 | Retroposon (SVA) | SENP7 | Intron | 2 |
chr3:107 287 946 | 315 | SINE (Alu) | DUBR | Intron | 2 |
chr3:111 507 514 | 335 | SINE (Alu) | LOC105374039 | Intron | 2 |
chr3:112 205 623 | 49 | LINE (L1) | SLC9C1 | Intron | 2 |
chr3:115 664 229 | 329 | SINE (Alu) | GAP43 | Intron | 2 |
chr3:119 025 405 | 319 | SINE (Alu) | IGSF11 | Intron | 2 |
chr3:121 849 956 | 314 | SINE (Alu) | EAF2 | Intron | 2 |
chr3:123 080 894 | 326 | SINE (Alu) | PDIA5 | Intron | 2 |
chr3:123 407 764 | 310 | SINE (Alu) | ADCY5 | Intron | 2 |
chr3:123 871 864 | 6 047 | LINE (L1) | MYLK | Intron | 2 |
chr3:124 687 657 | 316 | SINE (Alu) | KALRN | Intron | 2 |
chr3:124 922 699 | 134 | SINE (Alu) | MUC13 | Intron | 2 |
chr3:128 676 362 | 314 | SINE (Alu) | RPN1 | Intron | 2 |
chr3:128 955 332 | 177 | Retroposon (SVA) | CFAP92 | Intron | 1 |
chr3:130 090 880 | 300 | SINE (Alu) | ALG1L2 | Intron | 1 |
chr3:130 219 573 | 317 | SINE (Alu) | COL6A4P2 | Intron | 2 |
chr3:136 893 195 | 105 | LINE (L1) | NCK1 | Intron | 2 |
chr3:142 741 180 | 314 | SINE (Alu) | TRPC1 | Intron | 2 |
chr3:149 380 188 | 682 | Retroposon (SVA) | TM4SF1-AS1 | Intron | 2 |
chr3:149 380 313 | 1 377 | Retroposon (SVA) | TM4SF1-AS1 | Intron | 2 |
chr3:150 820 821 | 146 | Retroposon (SVA) | SIAH2-AS1 | Intron | 2 |
chr3:151 820 689 | 171 | SINE (Alu) | AADAC | Intron | 2 |
chr3:155 668 083 | 178 | SINE (Alu) | PLCH1 | Intron | 2 |
chr3:156 100 578 | 337 | SINE (Alu) | KCNAB1 | Intron | 2 |
chr3:157 436 295 | 323 | SINE (Alu) | PTX3 | Promoter | 2 |
chr3:157 436 295 | 323 | SINE (Alu) | VEPH1 | Intron | 2 |
chr3:158 245 130 | 339 | SINE (Alu) | RSRC1 | Intron | 2 |
chr3:160 546 055 | 161 | SINE (Alu) | KPNA4 | Intron | 2 |
chr3:168 481 273 | 319 | SINE (Alu) | EGFEM1P | Intron | 2 |
chr3:171 908 582 | 313 | SINE (Alu) | TMEM212 | Intron | 2 |
chr3:174 692 945 | 322 | SINE (Alu) | NAALADL2 | Intron | 2 |
chr3:178 393 247 | 333 | SINE (Alu) | KCNMB2 | Intron | 2 |
chr3:179 121 485 | 67 | Retroposon (SVA) | PIK3CA-DT | Intron | 2 |
chr3:181 475 037 | 3 202 | LINE (L1) | SOX2-OT | Intron | 2 |
chr3:182 153 132 | 129 | LINE (L1) | LOC105374243 | Intron | 2 |
chr3:183 870 209 | 304 | SINE (Alu) | MAP6D1 | Intron | 2 |
chr3:186 654 333 | 6 051 | LINE (L1) | HRG-AS1 | Intron | 2 |
chr3:187 240 158 | 329 | SINE (Alu) | MASP1 | Intron | 2 |
chr3:191 281 660 | 322 | SINE (Alu) | UTS2B | Intron | 2 |
chr3:191 390 410 | 77 | LTR (ERV1) | CCDC50 | Intron | 2 |
chr3:196 874 212 | 322 | SINE (Alu) | SENP5 | Intron | 2 |
chr4:1 308 027 | 318 | SINE (Alu) | MAEA | Intron | 2 |
chr4:2 570 071 | 317 | SINE (Alu) | FAM193A | Intron | 2 |
chr4:4 349 007 | 65 | LTR (ERV1) | NSG1 | Intron | 2 |
chr4:4 357 809 | 133 | LINE (L1) | NSG1 | Intron | 2 |
chr4:9 449 339 | 137 | LINE (L1) | DEFB131A | Intron | 2 |
chr4:12 237 653 | 133 | SINE (Alu) | LINC02270 | Intron | 2 |
chr4:13 761 218 | 146 | Retroposon (SVA) | LOC107986182 | Intron | 2 |
chr4:14 955 276 | 114 | LTR (ERVL) | CPEB2-DT | Intron | 2 |
chr4:15 615 472 | 237 | LTR (ERV1) | FBXL5 | Intron | 2 |
chr4:19 364 519 | 324 | SINE (Alu) | LINC02438 | Intron | 2 |
chr4:25 808 835 | 135 | SINE (Alu) | SEL1L3 | Intron | 2 |
chr4:36 323 570 | 314 | SINE (Alu) | DTHD1 | Intron | 2 |
chr4:39 408 924 | 322 | SINE (Alu) | KLB | Intron | 2 |
chr4:40 879 175 | 322 | SINE (Alu) | APBB2 | Intron | 2 |
chr4:41 049 360 | 133 | Retroposon (SVA) | APBB2 | Intron | 2 |
chr4:42 086 022 | 315 | SINE (Alu) | SLC30A9 | Intron | 2 |
chr4:47 005 771 | 423 | LINE (L1) | GABRB1 | Intron | 2 |
chr4:52 081 945 | 147 | LINE (CR1) | SPATA18 | Intron | 2 |
chr4:52 737 160 | 168 | SINE (Alu) | RASL11B | Intron | 2 |
chr4:53 549 475 | 320 | SINE (Alu) | PDGFRA | Intron | 2 |
chr4:54 154 775 | 159 | LTR (ERV1) | PDGFRA | Intron | 2 |
chr4:55 505 776 | 318 | SINE (Alu) | CLOCK | Intron | 2 |
chr4:64 351 027 | 290 | SINE (Alu) | TECRL | Intron | 2 |
chr4:68 079 050 | 325 | SINE (Alu) | UBA6-DT | Intron | 2 |
chr4:69 611 287 | 310 | SINE (Alu) | UGT2A2 | Intron | 2 |
chr4:69 762 349 | 175 | Retroposon (SVA) | SULT1B1 | Intron | 2 |
chr4:72 104 993 | 318 | SINE (Alu) | NPFFR2 | Intron | 2 |
chr4:75 861 612 | 314 | SINE (Alu) | PPEF2 | Intron | 2 |
chr4:76 072 654 | 316 | SINE (Alu) | ART3 | Intron | 2 |
chr4:76 496 764 | 2 059 | Retroposon (SVA) | SHROOM3 | Intron | 2 |
chr4:78 238 350 | 318 | SINE (Alu) | FRAS1 | Intron | 2 |
chr4:78 401 811 | 325 | SINE (Alu) | FRAS1 | Intron | 2 |
chr4:81 708 982 | 318 | SINE (Alu) | RASGEF1B | Intron | 2 |
chr4:85 549 216 | 314 | SINE (Alu) | ARHGAP24 | Intron | 2 |
chr4:85 663 335 | 318 | SINE (Alu) | ARHGAP24 | Intron | 2 |
chr4:86 021 227 | 160 | LTR (ERV1) | MAPK10 | Intron | 2 |
chr4:87 308 501 | 144 | SINE (Alu) | HSD17B13 | Intron | 2 |
chr4:89 042 102 | 214 | SINE (Alu) | FAM13A | Intron | 2 |
chr4:91 168 070 | 150 | Retroposon (SVA) | CCSER1 | Intron | 1 |
chr4:92 442 128 | 325 | SINE (Alu) | GRID2 | Intron | 2 |
chr4:94 492 114 | 324 | SINE (Alu) | PDLIM5 | Intron | 2 |
chr4:101 120 577 | 322 | SINE (Alu) | PPP3CA | Intron | 2 |
chr4:102 422 587 | 1 888 | LINE (L1) | SLC39A8 | Intron | 2 |
chr4:109 597 355 | 194 | Retroposon (SVA) | MCUB | Intron | 2 |
chr4:113 097 092 | 312 | SINE (Alu) | ANK2 | Intron | 2 |
chr4:114 628 766 | 319 | SINE (Alu) | UGT8 | Intron | 2 |
chr4:123 709 543 | 129 | LINE (L1) | LINC01091 | Intron | 2 |
chr4:126 675 052 | 476 | LINE (L1) | LOC105377411 | Intron | 2 |
chr4:128 286 079 | 326 | SINE (Alu) | PGRMC2 | Intron | 2 |
chr4:134 214 179 | 412 | LTR (ERVL) | PABPC4L | Intron | 2 |
chr4:136 885 360 | 137 | SINE (Alu) | LINC02511 | Intron | 2 |
chr4:138 304 044 | 331 | SINE (Alu) | LINC00498 | Intron | 2 |
chr4:139 289 130 | 294 | SINE (Alu) | MGARP | Intron | 2 |
chr4:140 017 765 | 151 | SINE (Alu) | MAML3 | Intron | 2 |
chr4:145 892 669 | 318 | SINE (Alu) | ZNF827 | Promoter | 2 |
chr4:145 892 669 | 318 | SINE (Alu) | ZNF827 | Intron | 2 |
chr4:146 304 128 | 6 041 | LINE (L1) | SLC10A7 | Intron | 2 |
chr4:147 132 785 | 324 | SINE (Alu) | LOC105377476 | Intron | 2 |
chr4:149 818 787 | 323 | SINE (Alu) | IQCM | Intron | 2 |
chr4:150 372 749 | 318 | SINE (Alu) | LRBA | Intron | 2 |
chr4:150 660 232 | 98 | Retroposon (SVA) | LRBA | Intron | 2 |
chr4:150 953 967 | 79 | Retroposon (SVA) | LRBA | Intron | 2 |
chr4:151 214 794 | 126 | Retroposon (SVA) | SH3D19 | Intron | 2 |
chr4:153 979 895 | 322 | SINE (Alu) | LOC101927947 | Intron | 2 |
chr4:163 836 593 | 223 | SINE (Alu) | MARCHF1 | Intron | 2 |
chr4:164 310 574 | 364 | LINE (L1) | MARCHF1 | Intron | 2 |
chr4:165 269 620 | 326 | SINE (Alu) | KLHL2 | Intron | 2 |
chr4:169 913 439 | 300 | SINE (Alu) | LOC105377530 | Intron | 2 |
chr4:173 123 062 | 319 | SINE (Alu) | GALNT7-DT | Intron | 2 |
chr4:173 228 288 | 316 | SINE (Alu) | GALNT7 | Intron | 2 |
chr4:173 865 543 | 317 | SINE (Alu) | LINC02269 | Intron | 2 |
chr4:181 070 771 | 321 | SINE (Alu) | LINC00290 | Intron | 2 |
chr4:185 056 645 | 309 | SINE (Alu) | LINC02436 | Intron | 2 |
chr4:185 440 757 | 304 | SINE (Alu) | C4orf47 | Intron | 2 |
chr4:186 491 744 | 54 | SINE (Alu) | F11-AS1 | Intron | 2 |
chr5:1 812 525 | 312 | SINE (Alu) | NDUFS6 | Intron | 2 |
chr5:7 845 925 | 312 | SINE (Alu) | C5orf49 | Intron | 2 |
chr5:10 634 867 | 319 | SINE (Alu) | ANKRD33B | Intron | 2 |
chr5:11 162 726 | 323 | SINE (Alu) | CTNND2 | Intron | 2 |
chr5:13 827 484 | 618 | LTR (ERVL) | DNAH5 | Intron | 2 |
chr5:16 716 503 | 310 | SINE (Alu) | MYO10 | Intron | 2 |
chr5:20 471 978 | 280 | LINE (L2) | CDH18 | Intron | 2 |
chr5:20 834 954 | 244 | LINE (L1) | LINC02241 | Intron | 2 |
chr5:25 233 803 | 294 | SINE (Alu) | LINC02211 | Intron | 2 |
chr5:32 762 455 | 329 | SINE (Alu) | NPR3 | Intron | 2 |
chr5:32 974 396 | 1 060 | LINE (L1) | LOC105374715 | Intron | 2 |
chr5:33 633 228 | 5 228 | LINE (L1) | ADAMTS12 | Intron | 2 |
chr5:33 797 437 | 6 058 | LINE (L1) | ADAMTS12 | Intron | 2 |
chr5:34 113 145 | 320 | SINE (Alu) | C1QTNF3-AMACR | Intron | 2 |
chr5:37 688 692 | 281 | SINE (Alu) | WDR70 | Intron | 2 |
chr5:39 292 866 | 335 | SINE (Alu) | C9 | Intron | 2 |
chr5:39 334 533 | 77 | Retroposon (SVA) | C9 | Intron | 2 |
chr5:54 087 760 | 65 | SINE (Alu) | ARL15 | Intron | 2 |
chr5:55 433 459 | 340 | SINE (Alu) | PLPP1 | Intron | 2 |
chr5:55 695 934 | 98 | Retroposon (SVA) | SLC38A9 | Intron | 2 |
chr5:55 871 816 | 328 | SINE (Alu) | IL31RA | Intron | 2 |
chr5:62 339 522 | 316 | SINE (Alu) | KIF2A | Intron | 2 |
chr5:62 561 274 | 324 | SINE (Alu) | IPO11 | Intron | 2 |
chr5:65 940 643 | 49 | Retroposon (SVA) | ERBIN | Intron | 2 |
chr5:68 967 632 | 650 | LINE (L1) | LOC107984116 | Intron | 2 |
chr5:69 515 538 | 97 | Retroposon (SVA) | OCLN | Intron | 2 |
chr5:76 172 419 | 101 | Retroposon (SVA) | SV2C | Intron | 2 |
chr5:76 974 446 | 295 | SINE (Alu) | CRHBP | Intron | 2 |
chr5:77 395 389 | 313 | SINE (Alu) | PDE8B | Intron | 2 |
chr5:77 457 767 | 325 | SINE (Alu) | WDR41 | Intron | 2 |
chr5:77 794 945 | 123 | Retroposon (SVA) | TBCA | Intron | 2 |
chr5:79 147 046 | 300 | SINE (Alu) | DMGDH | Intron | 2 |
chr5:82 140 242 | 223 | Retroposon (SVA) | ATG10 | Intron | 2 |
chr5:87 076 864 | 294 | SINE (Alu) | LOC101929380 | Intron | 2 |
chr5:90 154 950 | 6 070 | LINE (L1) | LINC01339 | Intron | 2 |
chr5:90 702 006 | 153 | SINE (Alu) | ADGRV1 | Intron | 2 |
chr5:95 658 504 | 323 | SINE (Alu) | LOC105379090 | Intron | 2 |
chr5:104 113 189 | 49 | SINE (Alu) | NIHCOLE | Intron | 2 |
chr5:104 402 721 | 291 | SINE (Alu) | NIHCOLE | Intron | 2 |
chr5:109 282 197 | 167 | LINE (L1) | LOC285638 | Intron | 2 |
chr5:111 450 624 | 186 | SINE (Alu) | CAMK4 | Intron | 2 |
chr5:115 404 024 | 289 | SINE (Alu) | LOC105379130 | Intron | 2 |
chr5:117 973 461 | 178 | LTR (ERVL) | LINC02147 | Intron | 2 |
chr5:131 517 547 | 328 | SINE (Alu) | RAPGEF6 | Intron | 2 |
chr5:137 059 137 | 234 | LINE (L2) | SPOCK1 | Intron | 2 |
chr5:140 215 541 | 327 | SINE (Alu) | CYSTM1 | Intron | 2 |
chr5:142 379 076 | 313 | SINE (Alu) | SPRY4-AS1 | Intron | 2 |
chr5:146 990 048 | 317 | SINE (Alu) | PPP2R2B | Intron | 2 |
chr5:147 258 151 | 294 | SINE (Alu) | STK32A | Intron | 2 |
chr5:155 906 881 | 2 494 | LINE (L1) | SGCD | Intron | 2 |
chr5:157 139 715 | 333 | SINE (Alu) | HAVCR2 | Intron | 2 |
chr5:158 376 055 | 254 | SINE (Alu) | LINC02227 | Intron | 2 |
chr5:159 695 129 | 316 | SINE (Alu) | LOC105377684 | Intron | 2 |
chr5:162 530 740 | 5 478 | LINE (L1) | LOC105377697 | Intron | 2 |
chr5:167 748 593 | 321 | SINE (Alu) | TENM2 | Intron | 2 |
chr5:170 774 320 | 310 | SINE (Alu) | GABRP | Intron | 2 |
chr5:173 116 811 | 118 | LINE (L1) | CREBRF | Intron | 1 |
chr5:176 305 313 | 479 | Retroposon (SVA) | SIMC1 | Intron | 2 |
chr5:176 306 174 | 50 | Retroposon (SVA) | SIMC1 | Intron | 2 |
chr5:177 025 394 | 330 | SINE (Alu) | ZNF346 | Intron | 2 |
chr5:177 635 730 | 1 229 | LINE (L1) | LOC202181 | Intron | 2 |
chr5:177 736 083 | 170 | SINE (Alu) | FAM153A | Intron | 2 |
chr5:178 458 165 | 63 | LINE (L1) | COL23A1 | Intron | 2 |
chr5:179 942 167 | 147 | SINE (Alu) | RNF130 | Intron | 2 |
chr5:180 922 590 | 321 | SINE (Alu) | BTNL8 | Intron | 2 |
chr5:180 941 894 | 122 | SINE (Alu) | BTNL8 | Intron | 2 |
chr6:2 773 768 | 292 | SINE (Alu) | WRNIP1 | Intron | 2 |
chr6:2 972 359 | 305 | SINE (Alu) | SERPINB6 | Promoter | 2 |
chr6:13 190 782 | 6 055 | LINE (L1) | PHACTR1 | Intron | 2 |
chr6:15 415 597 | 48 | Retroposon (SVA) | JARID2 | Intron | 1 |
chr6:15 415 618 | 50 | Retroposon (SVA) | JARID2 | Intron | 1 |
chr6:16 417 452 | 157 | LINE (L1) | ATXN1 | Intron | 2 |
chr6:17 416 151 | 320 | SINE (Alu) | CAP2 | Intron | 2 |
chr6:19 346 203 | 318 | SINE (Alu) | LOC107986575 | Intron | 2 |
chr6:20 168 888 | 314 | SINE (Alu) | MBOAT1 | Intron | 2 |
chr6:20 887 674 | 314 | SINE (Alu) | CDKAL1 | Intron | 2 |
chr6:27 484 973 | 87 | Retroposon (SVA) | LOC105375001 | Intron | 1 |
chr6:27 485 004 | 431 | Retroposon (SVA) | LOC105375001 | Intron | 1 |
chr6:29 731 770 | 2 300 | Retroposon (SVA) | HLA-F | Intron | 2 |
chr6:29 977 733 | 316 | SINE (Alu) | HCG9 | Intron | 2 |
chr6:29 986 044 | 327 | SINE (Alu) | POLR1HASP | Intron | 2 |
chr6:30 786 922 | 310 | SINE (Alu) | HCG20 | Intron | 2 |
chr6:30 815 374 | 100 | LTR (ERV1) | LINC00243 | Intron | 2 |
chr6:31 013 127 | 315 | SINE (Alu) | MUC22 | Intron | 2 |
chr6:31 409 512 | 84 | LINE (L1) | MICA | Intron | 2 |
chr6:32 528 617 | 311 | SINE (Alu) | HLA-DRB5 | Intron | 1 |
chr6:34 398 183 | 177 | Retroposon (SVA) | NUDT3 | Intron | 2 |
chr6:36 363 389 | 101 | LTR (ERV1) | ETV7 | Intron | 2 |
chr6:38 964 348 | 345 | Retroposon (SVA) | DNAH8 | Intron | 2 |
chr6:42 702 567 | 315 | SINE (Alu) | PRPH2 | Intron | 2 |
chr6:43 927 736 | 317 | SINE (Alu) | LINC01512 | Intron | 2 |
chr6:44 319 523 | 608 | LINE (L2) | SPATS1 | Intron | 2 |
chr6:47 505 626 | 805 | Retroposon (SVA) | CD2AP | Intron | 2 |
chr6:49 487 167 | 101 | LINE (L1) | CENPQ | Intron | 2 |
chr6:51 982 181 | 991 | Retroposon (SVA) | PKHD1 | Intron | 2 |
chr6:54 849 738 | 324 | SINE (Alu) | FAM83B | Intron | 2 |
chr6:64 312 982 | 307 | LINE (L1) | EYS | Intron | 1 |
chr6:65 454 072 | 309 | SINE (Alu) | EYS | Intron | 2 |
chr6:68 932 875 | 326 | SINE (Alu) | ADGRB3 | Intron | 2 |
chr6:69 061 778 | 55 | LINE (L1) | ADGRB3 | Intron | 2 |
chr6:69 122 017 | 76 | Retroposon (SVA) | ADGRB3 | Intron | 2 |
chr6:73 601 480 | 273 | Retroposon (SVA) | SLC17A5 | Intron | 2 |
chr6:73 632 007 | 338 | SINE (Alu) | SLC17A5 | Intron | 2 |
chr6:73 795 113 | 327 | SINE (Alu) | CD109 | Intron | 2 |
chr6:74 628 503 | 326 | SINE (Alu) | LOC101928516 | Intron | 2 |
chr6:77 654 536 | 303 | SINE (Alu) | MEI4 | Intron | 2 |
chr6:81 587 704 | 322 | SINE (Alu) | LOC105377871 | Intron | 2 |
chr6:88 947 722 | 129 | Retroposon (SVA) | RNGTT | Intron | 1 |
chr6:96 061 288 | 321 | SINE (Alu) | FUT9 | Intron | 2 |
chr6:96 193 217 | 1 014 | LINE (L1) | FUT9 | Intron | 2 |
chr6:96 497 728 | 68 | LINE (L1) | UFL1-AS1 | Intron | 2 |
chr6:97 803 451 | 305 | SINE (Alu) | LOC101927314 | Intron | 2 |
chr6:101 835 881 | 1 270 | LINE (L1) | GRIK2 | Intron | 2 |
chr6:107 078 566 | 136 | SINE (Alu) | BEND3 | Intron | 2 |
chr6:109 047 040 | 677 | Retroposon (SVA) | SESN1 | Intron | 2 |
chr6:109 047 060 | 315 | Retroposon (SVA) | SESN1 | Intron | 1 |
chr6:109 047 311 | 273 | Retroposon (SVA) | SESN1 | Intron | 1 |
chr6:110 473 738 | 308 | SINE (Alu) | SLC22A16 | Intron | 2 |
chr6:114 227 232 | 317 | SINE (Alu) | HDAC2-AS2 | Intron | 2 |
chr6:114 921 893 | 74 | LINE (L1) | LOC107986639 | Intron | 2 |
chr6:115 985 916 | 290 | SINE (Alu) | FRK | Intron | 2 |
chr6:117 434 720 | 320 | SINE (Alu) | GOPC | Intron | 2 |
chr6:117 477 503 | 110 | LTR (ERV1) | DCBLD1 | Intron | 2 |
chr6:122 658 846 | 321 | SINE (Alu) | PKIB | Intron | 2 |
chr6:126 102 518 | 314 | SINE (Alu) | TRMT11 | Intron | 2 |
chr6:130 293 637 | 291 | SINE (Alu) | SAMD3 | Intron | 2 |
chr6:130 854 322 | 316 | SINE (Alu) | EPB41L2 | Intron | 2 |
chr6:133 410 619 | 179 | SINE (Alu) | EYA4 | Intron | 2 |
chr6:136 151 778 | 71 | SINE (Alu) | PDE7B | Intron | 2 |
chr6:142 128 962 | 6 032 | LINE (L1) | NMBR | Intron | 2 |
chr6:143 630 226 | 312 | SINE (Alu) | PHACTR2 | Intron | 2 |
chr6:147 874 651 | 2 645 | LINE (L1) | SAMD5 | Intron | 2 |
chr6:148 481 014 | 283 | SINE (Alu) | SASH1 | Intron | 2 |
chr6:155 117 106 | 328 | SINE (Alu) | TIAM2 | Intron | 2 |
chr6:155 996 968 | 305 | SINE (Alu) | LOC101928923 | Intron | 2 |
chr6:157 076 539 | 328 | SINE (Alu) | ARID1B | Intron | 2 |
chr6:158 239 907 | 403 | Retroposon (SVA) | TULP4 | Intron | 1 |
chr6:158 349 074 | 263 | Retroposon (SVA) | TULP4 | Intron | 2 |
chr6:158 745 252 | 318 | SINE (Alu) | SYTL3 | Intron | 2 |
chr6:158 783 393 | 325 | SINE (Alu) | EZR | Intron | 2 |
chr6:160 915 407 | 315 | SINE (Alu) | LOC105378093 | Intron | 2 |
chr6:161 760 223 | 4 012 | LINE (L1) | PRKN | Intron | 2 |
chr6:163 046 353 | 327 | SINE (Alu) | PACRG | Intron | 2 |
chr6:165 866 403 | 332 | SINE (Alu) | PDE10A | Intron | 2 |
chr6:166 711 308 | 318 | SINE (Alu) | RPS6KA2 | Intron | 2 |
chr6:168 588 126 | 325 | SINE (Alu) | SMOC2 | Intron | 2 |
chr6:170 185 527 | 331 | SINE (Alu) | LOC154449 | Intron | 2 |
chr7:2 268 713 | 128 | Retroposon (SVA) | SNX8 | Intron | 1 |
chr7:8 495 321 | 327 | SINE (Alu) | NXPH1 | Intron | 2 |
chr7:10 465 264 | 353 | Retroposon (SVA) | MGC4859 | Intron | 2 |
chr7:10 465 325 | 226 | Retroposon (SVA) | MGC4859 | Intron | 2 |
chr7:15 423 543 | 134 | LTR (ERVL) | AGMO | Intron | 2 |
chr7:18 233 451 | 328 | SINE (Alu) | HDAC9 | Intron | 2 |
chr7:18 282 964 | 280 | SINE (Alu) | HDAC9 | Intron | 2 |
chr7:19 478 703 | 4 750 | LINE (L1) | LOC105375180 | Intron | 2 |
chr7:20 668 937 | 1 029 | Retroposon (SVA) | ABCB5 | Intron | 2 |
chr7:22 813 858 | 315 | SINE (Alu) | TOMM7 | Intron | 2 |
chr7:26 168 425 | 119 | LINE (L1) | NFE2L3 | Intron | 2 |
chr7:29 145 538 | 327 | SINE (Alu) | CHN2 | Intron | 2 |
chr7:31 761 097 | 81 | SINE (MIR) | PDE1C | Intron | 2 |
chr7:36 212 541 | 319 | SINE (Alu) | EEPD1 | Intron | 2 |
chr7:37 292 777 | 120 | Retroposon (SVA) | ELMO1 | Intron | 2 |
chr7:37 797 033 | 310 | SINE (Alu) | GPR141 | Intron | 2 |
chr7:64 809 491 | 125 | Retroposon (SVA) | ZNF138 | Intron | 2 |
chr7:67 126 181 | 6 044 | LINE (L1) | TYW1 | Intron | 2 |
chr7:67 145 044 | 319 | SINE (Alu) | TYW1 | Intron | 2 |
chr7:69 293 439 | 331 | SINE (Alu) | LOC105375345 | Intron | 2 |
chr7:78 107 874 | 322 | SINE (Alu) | MAGI2 | Intron | 2 |
chr7:78 517 185 | 328 | SINE (Alu) | MAGI2 | Intron | 2 |
chr7:79 976 821 | 69 | LTR (ERV1) | GNAI1 | Intron | 2 |
chr7:80 793 843 | 332 | SINE (Alu) | SEMA3C | Intron | 2 |
chr7:82 801 191 | 316 | SINE (Alu) | PCLO | Intron | 2 |
chr7:83 460 625 | 63 | LTR (ERV1) | SEMA3E | Intron | 2 |
chr7:84 299 804 | 69 | SINE (Alu) | SEMA3A | Intron | 2 |
chr7:85 113 607 | 306 | SINE (Alu) | SEMA3D | Intron | 2 |
chr7:88 751 024 | 314 | SINE (Alu) | LOC107986816 | Intron | 2 |
chr7:92 122 219 | 316 | SINE (Alu) | CYP51A1 | Intron | 2 |
chr7:95 149 737 | 326 | SINE (Alu) | PPP1R9A | Intron | 2 |
chr7:95 248 185 | 281 | SINE (Alu) | PPP1R9A | Intron | 2 |
chr7:100 948 850 | 52 | SINE (Alu) | MUC3A | Promoter | 1 |
chr7:100 948 850 | 52 | SINE (Alu) | MUC3A | Promoter | 1 |
chr7:100 973 081 | 331 | SINE (Alu) | MUC12 | Intron | 2 |
chr7:102 549 902 | 83 | SINE (Alu) | POLR2J3-UPK3BL2 | Intron | 1 |
chr7:105 255 127 | 324 | SINE (Alu) | SRPK2 | Intron | 2 |
chr7:105 924 008 | 312 | SINE (Alu) | CDHR3 | Intron | 2 |
chr7:108 188 803 | 6 062 | LINE (L1) | NRCAM | Intron | 2 |
chr7:110 844 692 | 97 | LINE (L1) | IMMP2L | Intron | 2 |
chr7:118 443 246 | 317 | SINE (Alu) | ANKRD7 | Intron | 2 |
chr7:119 619 753 | 312 | SINE (Alu) | LINC02476 | Intron | 2 |
chr7:122 469 788 | 326 | SINE (Alu) | CADPS2 | Intron | 2 |
chr7:122 733 485 | 329 | SINE (Alu) | CADPS2 | Intron | 2 |
chr7:123 455 107 | 6 076 | LINE (L1) | IQUB | Intron | 2 |
chr7:124 141 305 | 281 | SINE (Alu) | LOC102724577 | Intron | 2 |
chr7:124 952 959 | 320 | SINE (Alu) | POT1-AS1 | Intron | 2 |
chr7:125 022 558 | 167 | LTR (ERVL) | POT1-AS1 | Intron | 2 |
chr7:127 761 411 | 320 | SINE (Alu) | SND1 | Intron | 2 |
chr7:128 569 092 | 242 | SINE (Alu) | LINC01000 | Intron | 2 |
chr7:129 476 156 | 91 | Retroposon (SVA) | STRIP2 | Intron | 2 |
chr7:129 642 755 | 319 | SINE (Alu) | NRF1 | Intron | 2 |
chr7:130 591 386 | 627 | Retroposon (SVA) | COPG2 | Intron | 2 |
chr7:133 896 830 | 176 | SINE (Alu) | EXOC4 | Intron | 2 |
chr7:138 789 840 | 173 | SINE (Alu) | ATP6V0A4 | Intron | 2 |
chr7:139 101 477 | 364 | Retroposon (SVA) | ZC3HAV1 | Intron | 2 |
chr7:140 362 567 | 222 | Retroposon (SVA) | SLC37A3 | Intron | 2 |
chr7:142 048 504 | 86 | SINE (Alu) | MGAM | Intron | 2 |
chr7:142 823 654 | 95 | LINE (L1) | LOC105375541 | Intron | 2 |
chr7:146 390 925 | 68 | SINE (Alu) | CNTNAP2 | Intron | 2 |
chr7:149 554 812 | 49 | Retroposon (SVA) | ZNF767P | Intron | 2 |
chr7:150 342 492 | 54 | SINE (MIR) | RARRES2 | Promoter | 2 |
chr7:157 558 082 | 339 | SINE (Alu) | PTPRN2 | Intron | 2 |
chr7:157 656 079 | 316 | SINE (Alu) | PTPRN2 | Intron | 2 |
chr7:902 456 | 174 | SINE (Alu) | ADAP1 | Intron | 2 |
chr8:3 769 437 | 329 | SINE (Alu) | CSMD1 | Intron | 2 |
chr8:6 187 437 | 317 | SINE (Alu) | LOC105377797 | Intron | 2 |
chr8:6 196 793 | 91 | LINE (L1) | LOC105377797 | Intron | 2 |
chr8:9 062 603 | 322 | SINE (Alu) | ERI1 | Intron | 2 |
chr8:9 606 142 | 311 | SINE (Alu) | TNKS | Intron | 2 |
chr8:12 641 514 | 328 | SINE (Alu) | LOC729732 | Intron | 2 |
chr8:13 099 050 | 315 | SINE (Alu) | DLC1 | Intron | 2 |
chr8:15 041 743 | 156 | SINE (Alu) | SGCZ | Intron | 2 |
chr8:15 119 558 | 222 | SINE (Alu) | SGCZ | Intron | 2 |
chr8:16 245 296 | 275 | SINE (Alu) | MSR1 | Intron | 2 |
chr8:16 674 061 | 847 | LINE (L1) | LOC101929028 | Intron | 2 |
chr8:18 759 951 | 332 | SINE (Alu) | PSD3 | Intron | 2 |
chr8:22 625 878 | 330 | SINE (Alu) | BIN3 | Intron | 2 |
chr8:22 922 448 | 348 | SINE (Alu) | PEBP4 | Intron | 2 |
chr8:25 315 133 | 309 | SINE (Alu) | DOCK5 | Intron | 2 |
chr8:28 684 943 | 129 | LINE (L1) | EXTL3 | Intron | 2 |
chr8:31 383 933 | 335 | SINE (Alu) | LOC101929492 | Intron | 2 |
chr8:32 502 454 | 313 | SINE (Alu) | NRG1 | Intron | 2 |
chr8:32 514 935 | 198 | LINE (L1) | NRG1 | Intron | 2 |
chr8:33 904 132 | 284 | SINE (Alu) | LOC105379364 | Intron | 2 |
chr8:39 006 540 | 314 | SINE (Alu) | ADAM9 | Promoter | 2 |
chr8:39 006 540 | 314 | SINE (Alu) | ADAM9 | Intron | 2 |
chr8:41 299 576 | 135 | SINE (Alu) | SFRP1 | Intron | 2 |
chr8:42 182 377 | 311 | SINE (Alu) | PLAT | Intron | 2 |
chr8:43 179 665 | 98 | Retroposon (SVA) | HGSNAT | Promoter | 2 |
chr8:43 179 665 | 98 | Retroposon (SVA) | HGSNAT | Intron | 2 |
chr8:60 614 219 | 324 | SINE (Alu) | RAB2A | Intron | 2 |
chr8:64 686 420 | 77 | Retroposon (SVA) | CYP7B1 | Intron | 2 |
chr8:65 662 664 | 72 | Retroposon (SVA) | MTFR1 | Intron | 2 |
chr8:66 469 644 | 231 | LINE (L1) | VXN | Intron | 2 |
chr8:71 002 341 | 333 | SINE (Alu) | LOC105375894 | Intron | 2 |
chr8:71 293 805 | 323 | SINE (Alu) | EYA1 | Intron | 2 |
chr8:73 371 133 | 327 | SINE (Alu) | LOC105375899 | Promoter | 2 |
chr8:74 463 097 | 318 | SINE (Alu) | GDAP1 | Intron | 2 |
chr8:79 838 639 | 319 | SINE (Alu) | LOC101927040 | Intron | 2 |
chr8:80 855 344 | 314 | SINE (Alu) | ZNF704 | Intron | 2 |
chr8:82 289 319 | 326 | SINE (Alu) | LOC105375931 | Intron | 2 |
chr8:84 525 028 | 308 | SINE (Alu) | RALYL | Intron | 2 |
chr8:86 067 390 | 320 | SINE (Alu) | PSKH2 | Intron | 2 |
chr8:86 302 813 | 115 | LINE (L1) | SLC7A13 | Intron | 2 |
chr8:86 694 070 | 98 | Retroposon (SVA) | CNGB3 | Promoter | 2 |
chr8:86 694 070 | 98 | Retroposon (SVA) | CNGB3 | Intron | 2 |
chr8:86 964 152 | 73 | LTR (ERV1) | CNBD1 | Intron | 2 |
chr8:90 375 561 | 109 | LTR (ERVL) | LINC00534 | Intron | 2 |
chr8:90 685 715 | 843 | LTR (ERVK) | LOC105375633 | Intron | 1 |
chr8:90 686 770 | 517 | LTR (ERV1) | LOC105375633 | Intron | 2 |
chr8:94 491 158 | 168 | SINE (Alu) | VIRMA | Promoter | 2 |
chr8:94 491 158 | 168 | SINE (Alu) | VIRMA | Intron | 2 |
chr8:95 455 549 | 314 | SINE (Alu) | CFAP418-AS1 | Intron | 2 |
chr8:95 771 303 | 320 | SINE (Alu) | CFAP418-AS1 | Intron | 2 |
chr8:109 089 362 | 322 | SINE (Alu) | TRHR | Intron | 2 |
chr8:116 034 779 | 275 | SINE (Alu) | LINC00536 | Intron | 2 |
chr8:124 877 714 | 283 | SINE (Alu) | LINC00964 | Intron | 2 |
chr8:125 327 685 | 353 | SINE (Alu) | NSMCE2 | Intron | 2 |
chr8:126 853 220 | 290 | SINE (Alu) | LOC105375751 | Intron | 2 |
chr8:127 025 866 | 325 | SINE (Alu) | LOC105375751 | Intron | 2 |
chr8:128 695 771 | 321 | SINE (Alu) | LINC00976 | Intron | 2 |
chr8:128 825 941 | 179 | Retroposon (SVA) | LINC00976 | Intron | 1 |
chr8:128 826 105 | 401 | Retroposon (SVA) | LINC00976 | Intron | 2 |
chr8:129 258 242 | 278 | SINE (Alu) | CCDC26 | Intron | 2 |
chr8:138 044 826 | 318 | SINE (Alu) | LOC401478 | Intron | 2 |
chr8:138 313 721 | 313 | SINE (Alu) | FAM135B | Intron | 2 |
chr8:140 037 950 | 328 | SINE (Alu) | TRAPPC9 | Intron | 2 |
chr8:140 950 042 | 69 | LTR (ERV1) | PTK2 | Intron | 2 |
chr9:4 237 128 | 293 | SINE (Alu) | GLIS3 | Intron | 2 |
chr9:4 814 224 | 290 | SINE (Alu) | RCL1 | Intron | 2 |
chr9:7 035 315 | 317 | SINE (Alu) | KDM4C | Intron | 2 |
chr9:7 852 522 | 326 | SINE (Alu) | DMAC1 | Intron | 2 |
chr9:10 461 247 | 315 | SINE (Alu) | PTPRD | Intron | 2 |
chr9:15 234 388 | 126 | Retroposon (SVA) | TTC39B | Intron | 2 |
chr9:18 584 279 | 6 097 | LINE (L1) | ADAMTSL1 | Intron | 2 |
chr9:30 495 884 | 1 261 | LINE (L1) | LINC01242 | Intron | 2 |
chr9:30 560 926 | 63 | SINE (Alu) | LINC01242 | Intron | 2 |
chr9:32 463 887 | 168 | LINE (L1) | RIGI | Intron | 2 |
chr9:32 906 891 | 65 | LTR (ERV1) | APTX | Intron | 2 |
chr9:33 130 552 | 2 028 | Retroposon (SVA) | B4GALT1 | Intron | 2 |
chr9:37 594 236 | 324 | SINE (Alu) | SHB | Intron | 2 |
chr9:41 047 836 | 790 | LINE (L1) | FRG1HP | Intron | 2 |
chr9:61 209 379 | 338 | SINE (Alu) | FAM74A4 | Intron | 2 |
chr9:67 083 505 | 299 | SINE (Alu) | CNTNAP3P2 | Intron | 2 |
chr9:70 917 552 | 318 | SINE (Alu) | TRPM3 | Intron | 2 |
chr9:71 308 789 | 325 | SINE (Alu) | TRPM3 | Intron | 2 |
chr9:71 929 859 | 335 | SINE (Alu) | C9orf85 | Intron | 2 |
chr9:72 616 616 | 313 | SINE (Alu) | TMC1 | Intron | 2 |
chr9:72 800 719 | 334 | SINE (Alu) | TMC1 | Intron | 2 |
chr9:72 806 388 | 97 | Retroposon (SVA) | TMC1 | Intron | 2 |
chr9:72 928 052 | 347 | SINE (Alu) | ALDH1A1 | Intron | 2 |
chr9:76 063 864 | 407 | Retroposon (SVA) | PCSK5 | Intron | 2 |
chr9:76 836 353 | 326 | SINE (Alu) | PRUNE2 | Intron | 2 |
chr9:90 432 247 | 306 | SINE (Alu) | LINC01508 | Intron | 2 |
chr9:92 520 051 | 320 | SINE (Alu) | CENPP | Intron | 2 |
chr9:94 625 119 | 314 | SINE (Alu) | FBP1 | Intron | 2 |
chr9:96 301 413 | 321 | SINE (Alu) | HSD17B3 | Intron | 2 |
chr9:98 328 029 | 327 | SINE (Alu) | GABBR2 | Intron | 2 |
chr9:103 314 170 | 189 | SINE (Alu) | LINC01492 | Intron | 2 |
chr9:107 460 892 | 61 | SINE (Alu) | LINC01509 | Intron | 2 |
chr9:109 499 102 | 307 | SINE (Alu) | PTPN3 | Promoter | 2 |
chr9:109 499 102 | 307 | SINE (Alu) | PALM2AKAP2 | Intron | 2 |
chr9:112 106 751 | 326 | SINE (Alu) | SUSD1 | Intron | 2 |
chr9:112 514 852 | 225 | Retroposon (SVA) | KIAA1958 | Intron | 2 |
chr9:112 525 962 | 261 | Retroposon (SVA) | KIAA1958 | Intron | 2 |
chr9:115 165 982 | 292 | SINE (Alu) | DELEC1 | Intron | 2 |
chr9:116 840 550 | 351 | Retroposon (SVA) | LOC105376239 | Intron | 2 |
chr9:118 060 564 | 357 | SINE (Alu) | TLR4 | Intron | 2 |
chr9:121 971 181 | 308 | Retroposon (SVA) | TTLL11 | Intron | 2 |
chr9:123 802 498 | 79 | LINE (L2) | DENND1A | Intron | 2 |
chr9:125 458 887 | 431 | Retroposon (SVA) | MAPKAP1 | Intron | 2 |
chr9:125 577 664 | 258 | Retroposon (SVA) | MAPKAP1 | Intron | 2 |
chr9:125 780 971 | 115 | Retroposon (SVA) | PBX3 | Intron | 2 |
chr9:129 689 820 | 312 | SINE (Alu) | PRRX2 | Intron | 2 |
chr9:262 447 | 320 | SINE (Alu) | DOCK8 | Intron | 2 |
chr9:848 895 | 334 | SINE (Alu) | DMRT1 | Intron | 2 |
chr9:862 106 | 114 | Retroposon (SVA) | DMRT1 | Intron | 2 |
chr10:14 442 801 | 327 | SINE (Alu) | FRMD4A | Intron | 2 |
chr10:17 670 781 | 800 | Retroposon (SVA) | STAM | Intron | 2 |
chr10:19 261 790 | 317 | SINE (Alu) | MALRD1 | Intron | 2 |
chr10:21 057 584 | 49 | SINE (Alu) | NEBL | Intron | 2 |
chr10:25 418 756 | 6 047 | LINE (L1) | GPR158 | Intron | 2 |
chr10:25 668 385 | 323 | SINE (Alu) | LINC00836 | Intron | 2 |
chr10:26 587 715 | 268 | SINE (Alu) | LINC03028 | Intron | 2 |
chr10:26 672 154 | 194 | SINE (Alu) | SELENOOLP | Intron | 2 |
chr10:28 813 597 | 314 | SINE (Alu) | LINC01517 | Intron | 2 |
chr10:28 816 354 | 313 | SINE (Alu) | LINC01517 | Intron | 2 |
chr10:29 697 180 | 97 | Retroposon (SVA) | SVIL | Intron | 2 |
chr10:29 729 670 | 173 | SINE (Alu) | SVIL | Intron | 2 |
chr10:30 325 832 | 312 | SINE (Alu) | MTPAP | Intron | 2 |
chr10:32 647 469 | 54 | SINE (Alu) | CCDC7 | Intron | 2 |
chr10:34 256 748 | 319 | SINE (Alu) | PARD3 | Intron | 2 |
chr10:46 461 032 | 319 | SINE (Alu) | LINC00842 | Intron | 1 |
chr10:46 876 544 | 303 | SINE (Alu) | FRMPD2B | Promoter | 2 |
chr10:46 876 544 | 303 | SINE (Alu) | FRMPD2B | Intron | 2 |
chr10:49 163 557 | 337 | SINE (Alu) | TMEM273 | Intron | 2 |
chr10:50 479 036 | 345 | SINE (Alu) | SGMS1 | Intron | 2 |
chr10:52 102 653 | 275 | SINE (Alu) | PRKG1 | Intron | 2 |
chr10:52 707 167 | 323 | SINE (Alu) | LNCAROD | Intron | 2 |
chr10:54 167 762 | 83 | LTR (ERV1) | PCDH15 | Intron | 2 |
chr10:54 223 519 | 324 | SINE (Alu) | PCDH15 | Intron | 2 |
chr10:54 380 550 | 330 | SINE (Alu) | PCDH15 | Intron | 2 |
chr10:54 421 459 | 328 | SINE (Alu) | PCDH15 | Intron | 2 |
chr10:55 002 597 | 62 | LTR (ERV1) | PCDH15 | Intron | 2 |
chr10:59 225 142 | 326 | SINE (Alu) | PHYHIPL | Intron | 2 |
chr10:60 365 085 | 286 | SINE (Alu) | ANK3 | Intron | 2 |
chr10:68 235 132 | 326 | SINE (Alu) | LINC02640 | Intron | 2 |
chr10:69 850 403 | 310 | SINE (Alu) | COL13A1 | Intron | 2 |
chr10:70 407 971 | 341 | Retroposon (SVA) | EIF4EBP2 | Intron | 1 |
chr10:70 686 915 | 78 | Retroposon (SVA) | ADAMTS14 | Intron | 2 |
chr10:70 845 655 | 320 | SINE (Alu) | SGPL1 | Intron | 2 |
chr10:71 433 771 | 327 | SINE (Alu) | CDH23 | Intron | 2 |
chr10:73 683 762 | 337 | SINE (Alu) | AGAP5 | Promoter | 2 |
chr10:73 683 762 | 337 | SINE (Alu) | AGAP5 | Intron | 2 |
chr10:74 470 576 | 142 | LINE (L1) | ADK | Intron | 2 |
chr10:75 333 382 | 180 | Retroposon (SVA) | ZNF503-AS1 | Intron | 1 |
chr10:80 543 911 | 209 | LTR (ERV1) | SH2D4B | Intron | 1 |
chr10:84 223 486 | 314 | SINE (Alu) | LRIT2 | Intron | 2 |
chr10:86 016 231 | 311 | SINE (Alu) | GRID1 | Intron | 2 |
chr10:89 350 315 | 112 | SINE (Alu) | IFIT3 | Intron | 2 |
chr10:92 975 822 | 223 | Retroposon (SVA) | EXOC6 | Intron | 2 |
chr10:99 838 521 | 52 | Retroposon (SVA) | ABCC2 | Intron | 1 |
chr10:101 975 999 | 320 | SINE (Alu) | ARMH3 | Intron | 2 |
chr10:102 036 178 | 141 | Retroposon (SVA) | ARMH3 | Intron | 2 |
chr10:103 129 540 | 177 | Retroposon (SVA) | NT5C2 | Intron | 1 |
chr10:103 583 766 | 259 | SINE (Alu) | NEURL1 | Intron | 2 |
chr10:104 057 438 | 194 | SINE (Alu) | COL17A1 | Intron | 2 |
chr10:110 251 001 | 311 | SINE (Alu) | MXI1 | Intron | 2 |
chr10:112 314 098 | 315 | SINE (Alu) | GUCY2GP | Intron | 2 |
chr10:114 787 733 | 90 | Retroposon (SVA) | LOC101927692 | Intron | 2 |
chr10:116 335 447 | 324 | SINE (Alu) | CCDC172 | Intron | 2 |
chr10:119 281 154 | 332 | SINE (Alu) | GRK5 | Intron | 2 |
chr10:121 911 777 | 163 | SINE (Alu) | ATE1 | Intron | 2 |
chr10:127 392 027 | 314 | SINE (Alu) | DOCK1 | Intron | 2 |
chr10:130 096 568 | 97 | LINE (L1) | C10orf143 | Intron | 2 |
chr10:132 874 286 | 169 | LINE (L1) | CFAP46 | Intron | 2 |
chr10:133 217 518 | 118 | SINE (Alu) | KNDC1 | Intron | 2 |
chr11:1 576 989 | 66 | SINE (Alu) | KRTAP5-AS1 | Intron | 2 |
chr11:2 749 569 | 124 | SINE (Alu) | KCNQ1 | Intron | 2 |
chr11:4 138 052 | 49 | Retroposon (SVA) | RRM1 | Intron | 1 |
chr11:4 886 716 | 236 | SINE (Alu) | MMP26 | Intron | 2 |
chr11:5 863 905 | 320 | SINE (Alu) | TRIM5 | Intron | 2 |
chr11:6 349 738 | 67 | SINE (Alu) | LOC101927825 | Intron | 2 |
chr11:7 331 214 | 329 | SINE (Alu) | SYT9 | Intron | 2 |
chr11:8 424 808 | 327 | SINE (Alu) | STK33 | Intron | 2 |
chr11:8 865 752 | 318 | SINE (Alu) | DENND2B | Intron | 2 |
chr11:9 864 386 | 330 | SINE (Alu) | LOC101928008 | Intron | 2 |
chr11:10 615 934 | 315 | SINE (Alu) | IRAG1 | Intron | 2 |
chr11:11 926 964 | 2 749 | Retroposon (SVA) | USP47 | Intron | 2 |
chr11:13 791 469 | 332 | SINE (Alu) | LINC02548 | Intron | 2 |
chr11:14 478 463 | 321 | SINE (Alu) | COPB1 | Intron | 2 |
chr11:15 998 429 | 322 | SINE (Alu) | SOX6 | Intron | 2 |
chr11:19 860 081 | 223 | Retroposon (SVA) | NAV2 | Intron | 2 |
chr11:22 241 253 | 124 | LINE (L1) | ANO5 | Intron | 2 |
chr11:22 243 729 | 1 122 | LINE (L1) | ANO5 | Intron | 2 |
chr11:24 771 395 | 320 | SINE (Alu) | LUZP2 | Intron | 2 |
chr11:27 121 782 | 6 058 | LINE (L1) | BBOX1 | Intron | 2 |
chr11:27 436 218 | 388 | LINE (L1) | LGR4 | Intron | 2 |
chr11:32 412 716 | 310 | SINE (Alu) | WT1 | Promoter | 2 |
chr11:32 412 716 | 310 | SINE (Alu) | WT1 | Intron | 2 |
chr11:42 034 345 | 330 | SINE (Alu) | LINC02745 | Intron | 2 |
chr11:45 738 460 | 277 | Retroposon (SVA) | LOC100507384 | Intron | 2 |
chr11:47 785 087 | 304 | SINE (Alu) | NUP160 | Intron | 2 |
chr11:49 634 261 | 302 | SINE (Alu) | GRM5P1 | Intron | 2 |
chr11:58 139 863 | 65 | LINE (L1) | OR9Q1 | Intron | 2 |
chr11:59 645 329 | 383 | Retroposon (SVA) | PATL1 | Intron | 2 |
chr11:60 525 909 | 315 | SINE (Alu) | MS4A13 | Intron | 2 |
chr11:61 239 572 | 427 | LTR (ERV1) | PGA4 | Intron | 1 |
chr11:62 492 876 | 319 | SINE (Alu) | AHNAK | Intron | 2 |
chr11:63 893 356 | 259 | LINE (L1) | MARK2 | Intron | 2 |
chr11:65 239 632 | 130 | Retroposon (SVA) | SLC22A20P | Intron | 2 |
chr11:66 216 853 | 320 | SINE (Alu) | PACS1 | Intron | 2 |
chr11:67 222 617 | 535 | Retroposon (SVA) | KDM2A | Intron | 2 |
chr11:74 353 859 | 76 | Retroposon (SVA) | PGM2L1 | Intron | 2 |
chr11:74 656 965 | 91 | LINE (L1) | POLD3 | Intron | 2 |
chr11:76 619 299 | 608 | Retroposon (SVA) | LINC02757 | Intron | 2 |
chr11:77 098 076 | 179 | Retroposon (SVA) | CAPN5 | Intron | 2 |
chr11:77 098 581 | 49 | Retroposon (SVA) | CAPN5 | Intron | 1 |
chr11:77 098 721 | 225 | Retroposon (SVA) | CAPN5 | Intron | 2 |
chr11:77 279 527 | 313 | SINE (Alu) | GDPD4 | Intron | 2 |
chr11:78 784 911 | 329 | SINE (Alu) | TENM4 | Intron | 2 |
chr11:78 879 330 | 594 | Retroposon (SVA) | TENM4 | Intron | 1 |
chr11:83 018 315 | 61 | LINE (L1) | RAB30 | Intron | 2 |
chr11:86 259 222 | 317 | SINE (Alu) | EED | Intron | 2 |
chr11:87 154 955 | 166 | LINE (L1) | TMEM135 | Intron | 2 |
chr11:89 474 978 | 332 | SINE (Alu) | NOX4 | Intron | 2 |
chr11:90 267 331 | 186 | LINE (L1) | DISC1FP1 | Intron | 2 |
chr11:92 875 310 | 314 | SINE (Alu) | FAT3 | Intron | 2 |
chr11:99 858 676 | 328 | SINE (Alu) | CNTN5 | Intron | 2 |
chr11:100 748 679 | 67 | LTR (ERV1) | ARHGAP42 | Intron | 2 |
chr11:100 910 651 | 321 | SINE (Alu) | ARHGAP42 | Intron | 2 |
chr11:102 477 580 | 220 | SINE (Alu) | LOC102723838 | Intron | 2 |
chr11:103 330 537 | 324 | SINE (Alu) | DYNC2H1 | Intron | 2 |
chr11:104 915 862 | 323 | SINE (Alu) | CASP4LP | Intron | 2 |
chr11:112 331 792 | 137 | SINE (Alu) | LINC02762 | Intron | 2 |
chr11:117 251 250 | 88 | Retroposon (SVA) | RNF214 | Intron | 2 |
chr11:117 812 780 | 317 | SINE (Alu) | DSCAML1 | Intron | 2 |
chr11:118 449 416 | 320 | SINE (Alu) | KMT2A | Intron | 2 |
chr11:119 009 438 | 322 | SINE (Alu) | CENATAC | Promoter | 2 |
chr11:119 009 438 | 322 | SINE (Alu) | CENATAC | Intron | 2 |
chr11:119 253 538 | 265 | Retroposon (SVA) | CBL | Intron | 2 |
chr11:119 507 624 | 806 | Retroposon (SVA) | USP2-AS1 | Intron | 2 |
chr11:119 507 776 | 550 | Retroposon (SVA) | USP2-AS1 | Intron | 2 |
chr11:122 406 922 | 307 | SINE (Alu) | MIR100HG | Intron | 2 |
chr11:127 071 221 | 331 | SINE (Alu) | LOC101929473 | Intron | 2 |
chr11:129 889 646 | 315 | SINE (Alu) | NFRKB | Intron | 2 |
chr11:134 435 747 | 317 | LINE (L1) | B3GAT1-DT | Promoter | 2 |
chr11:134 435 747 | 317 | LINE (L1) | B3GAT1-DT | Intron | 2 |
chr11:428 013 | 318 | SINE (Alu) | ANO9 | Intron | 2 |
chr11:696 721 | 134 | SINE (Alu) | EPS8L2 | Intron | 2 |
chr11:711 988 | 299 | SINE (Alu) | EPS8L2 | Intron | 2 |
chr12:1 980 674 | 319 | SINE (Alu) | CACNA1C | Intron | 2 |
chr12:2 829 906 | 262 | SINE (Alu) | ITFG2 | Promoter | 2 |
chr12:2 829 906 | 262 | SINE (Alu) | ITFG2 | Intron | 2 |
chr12:7 451 371 | 285 | SINE (Alu) | CD163L1 | Intron | 2 |
chr12:8 184 249 | 400 | Retroposon (SVA) | ZNF705A | Intron | 2 |
chr12:9 349 121 | 79 | Retroposon (SVA) | LINC02367 | Intron | 2 |
chr12:9 996 539 | 250 | SINE (Alu) | CLEC1B | Intron | 2 |
chr12:10 081 587 | 318 | SINE (Alu) | CLEC1A | Intron | 2 |
chr12:11 026 423 | 307 | SINE (Alu) | PRH1-PRR4 | Intron | 2 |
chr12:12 780 744 | 1 782 | LINE (L1) | APOLD1 | Intron | 2 |
chr12:14 951 697 | 321 | SINE (Alu) | ARHGDIB | Promoter | 2 |
chr12:14 951 697 | 321 | SINE (Alu) | ARHGDIB | Intron | 2 |
chr12:18 598 680 | 288 | SINE (Alu) | PIK3C2G | Intron | 2 |
chr12:19 653 272 | 285 | SINE (Alu) | AEBP2 | Intron | 2 |
chr12:21 662 601 | 62 | LTR (ERV1) | LDHB | Intron | 2 |
chr12:21 933 008 | 332 | SINE (Alu) | ABCC9 | Intron | 2 |
chr12:26 785 265 | 174 | Retroposon (SVA) | ITPR2 | Intron | 1 |
chr12:26 785 882 | 126 | Retroposon (SVA) | ITPR2 | Intron | 1 |
chr12:27 711 861 | 315 | SINE (Alu) | MRPS35 | Intron | 2 |
chr12:28 264 364 | 308 | SINE (Alu) | CCDC91 | Intron | 2 |
chr12:28 285 662 | 315 | SINE (Alu) | CCDC91 | Intron | 2 |
chr12:29 663 691 | 185 | SINE (Alu) | TMTC1 | Intron | 2 |
chr12:29 670 964 | 312 | SINE (Alu) | TMTC1 | Intron | 2 |
chr12:31 650 024 | 315 | SINE (Alu) | ETFBKMT | Intron | 2 |
chr12:31 923 477 | 313 | SINE (Alu) | LINC02422 | Intron | 2 |
chr12:40 279 206 | 306 | SINE (Alu) | LRRK2 | Intron | 2 |
chr12:40 438 980 | 306 | SINE (Alu) | MUC19 | Intron | 2 |
chr12:41 453 905 | 240 | SINE (Alu) | PDZRN4 | Intron | 2 |
chr12:42 228 294 | 98 | Retroposon (SVA) | YAF2 | Intron | 2 |
chr12:43 524 175 | 1 076 | LINE (L1) | ADAMTS20 | Intron | 2 |
chr12:45 025 760 | 310 | SINE (Alu) | DBX2 | Intron | 2 |
chr12:50 776 324 | 308 | SINE (Alu) | ATF1 | Intron | 2 |
chr12:56 558 296 | 304 | SINE (Alu) | RBMS2 | Intron | 2 |
chr12:62 883 907 | 329 | SINE (Alu) | PPM1H | Intron | 2 |
chr12:64 204 047 | 85 | LINE (L1) | KICS2 | Intron | 2 |
chr12:64 783 847 | 188 | SINE (Alu) | TBC1D30 | Intron | 2 |
chr12:66 617 791 | 332 | SINE (Alu) | GRIP1 | Intron | 2 |
chr12:67 954 736 | 324 | SINE (Alu) | LINC01479 | Intron | 2 |
chr12:70 086 207 | 63 | LTR (ERV1) | PRANCR | Intron | 1 |
chr12:78 003 152 | 329 | SINE (Alu) | NAV3 | Intron | 2 |
chr12:80 805 951 | 135 | SINE (Alu) | LIN7A | Intron | 2 |
chr12:85 112 496 | 781 | LINE (L1) | LRRIQ1 | Intron | 2 |
chr12:86 811 026 | 109 | LINE (L1) | MGAT4C | Intron | 2 |
chr12:91 448 414 | 292 | SINE (Alu) | LOC105369896 | Intron | 2 |
chr12:92 452 722 | 65 | SINE (Alu) | LINC02397 | Intron | 2 |
chr12:95 355 501 | 310 | SINE (Alu) | LOC105369917 | Intron | 2 |
chr12:95 907 477 | 51 | Retroposon (SVA) | CCDC38 | Intron | 2 |
chr12:99 387 859 | 177 | SINE (Alu) | ANKS1B | Intron | 2 |
chr12:100 294 427 | 196 | Retroposon (SVA) | SCYL2 | Intron | 1 |
chr12:104 923 205 | 187 | SINE (Alu) | SLC41A2 | Intron | 2 |
chr12:105 044 596 | 308 | SINE (Alu) | NOPCHAP1 | Intron | 2 |
chr12:106 497 167 | 321 | SINE (Alu) | POLR3B | Intron | 2 |
chr12:124 073 312 | 310 | SINE (Alu) | ZNF664 | Intron | 2 |
chr12:126 405 316 | 326 | SINE (Alu) | LINC02350 | Intron | 2 |
chr12:130 604 739 | 323 | SINE (Alu) | RIMBP2 | Intron | 2 |
chr12:131 926 411 | 79 | Retroposon (SVA) | LOC107984455 | Intron | 2 |
chr12:132 789 672 | 57 | SINE (Alu) | GOLGA3 | Intron | 1 |
chr12:132 868 572 | 181 | SINE (Alu) | CHFR | Intron | 2 |
chr12:676 194 | 133 | SINE (Alu) | LINC02455 | Intron | 2 |
chr13:18 196 939 | 197 | SINE (Alu) | FAM230C | Intron | 2 |
chr13:21 320 624 | 286 | SINE (Alu) | MIPEPP3 | Intron | 2 |
chr13:21 448 227 | 144 | Retroposon (SVA) | ZDHHC20 | Intron | 2 |
chr13:21 448 228 | 497 | Retroposon (SVA) | ZDHHC20 | Intron | 2 |
chr13:21 448 382 | 77 | Retroposon (SVA) | ZDHHC20 | Intron | 1 |
chr13:25 264 752 | 135 | SINE (Alu) | MTMR6 | Intron | 2 |
chr13:28 964 737 | 320 | SINE (Alu) | MTUS2 | Intron | 2 |
chr13:28 990 621 | 66 | LTR (ERV1) | MTUS2 | Intron | 2 |
chr13:40 955 535 | 98 | Retroposon (SVA) | ELF1 | Intron | 2 |
chr13:41 881 722 | 204 | Retroposon (SVA) | VWA8 | Intron | 2 |
chr13:41 881 722 | 126 | Retroposon (SVA) | VWA8 | Intron | 2 |
chr13:42 152 649 | 324 | SINE (Alu) | DGKH | Intron | 2 |
chr13:42 197 251 | 413 | LINE (L1) | DGKH | Intron | 2 |
chr13:43 416 199 | 447 | Retroposon (SVA) | ENOX1 | Intron | 2 |
chr13:45 485 411 | 795 | Retroposon (SVA) | COG3 | Intron | 2 |
chr13:46 073 596 | 308 | SINE (Alu) | CPB2-AS1 | Intron | 2 |
chr13:46 470 173 | 298 | SINE (Alu) | LINC01198 | Promoter | 2 |
chr13:46 470 173 | 298 | SINE (Alu) | LINC01198 | Intron | 2 |
chr13:46 557 525 | 328 | SINE (Alu) | LRCH1 | Intron | 2 |
chr13:46 584 006 | 3 087 | Retroposon (SVA) | LRCH1 | Intron | 2 |
chr13:59 890 901 | 326 | SINE (Alu) | DIAPH3 | Intron | 2 |
chr13:60 037 033 | 130 | LINE (L1) | DIAPH3-AS1 | Intron | 2 |
chr13:60 647 021 | 1 430 | LINE (L1) | LINC00378 | Intron | 2 |
chr13:60 715 401 | 390 | LINE (L1) | LINC00378 | Intron | 2 |
chr13:60 758 287 | 312 | SINE (Alu) | LINC00378 | Intron | 2 |
chr13:60 793 259 | 309 | SINE (Alu) | LINC00378 | Intron | 2 |
chr13:67 329 321 | 237 | SINE (Alu) | LINC00364 | Intron | 2 |
chr13:78 010 527 | 313 | SINE (Alu) | OBI1-AS1 | Intron | 2 |
chr13:78 077 535 | 313 | SINE (Alu) | OBI1-AS1 | Intron | 2 |
chr13:80 799 588 | 328 | SINE (Alu) | LOC105370278 | Intron | 2 |
chr13:80 948 934 | 330 | SINE (Alu) | LOC105370278 | Intron | 2 |
chr13:84 899 424 | 231 | SINE (Alu) | LOC105370290 | Intron | 2 |
chr13:89 749 575 | 327 | SINE (Alu) | LOC107984621 | Intron | 2 |
chr13:91 609 018 | 321 | SINE (Alu) | GPC5 | Intron | 2 |
chr13:91 861 711 | 294 | SINE (Alu) | GPC5 | Intron | 2 |
chr13:92 172 972 | 319 | SINE (Alu) | GPC5 | Intron | 2 |
chr13:92 448 880 | 266 | SINE (Alu) | GPC5 | Intron | 2 |
chr13:92 538 791 | 193 | LINE (L1) | GPC5 | Intron | 2 |
chr13:94 109 467 | 85 | LINE (L1) | GPC6 | Intron | 2 |
chr13:98 151 042 | 326 | SINE (Alu) | FARP1 | Intron | 2 |
chr13:100 883 706 | 318 | SINE (Alu) | NALCN-AS1 | Intron | 2 |
chr13:101 737 015 | 334 | SINE (Alu) | FGF14 | Intron | 2 |
chr13:112 678 489 | 80 | Retroposon (SVA) | ATP11AUN | Intron | 2 |
chr13:112 866 638 | 313 | SINE (Alu) | ATP11A | Intron | 2 |
chr13:112 937 994 | 244 | LTR (ERV1) | MCF2L | Intron | 2 |
chr13:113 357 049 | 132 | SINE (Alu) | GRTP1-AS1 | Intron | 2 |
chr13:114 116 529 | 325 | SINE (Alu) | RASA3 | Intron | 2 |
chr14:20 016 135 | 352 | SINE (Alu) | OR4K14 | Intron | 2 |
chr14:20 506 551 | 125 | Retroposon (SVA) | RNASE10 | Intron | 2 |
chr14:20 506 760 | 73 | Retroposon (SVA) | RNASE10 | Intron | 2 |
chr14:22 637 459 | 176 | Retroposon (SVA) | OR6J1 | Intron | 2 |
chr14:22 637 543 | 533 | Retroposon (SVA) | OR6J1 | Intron | 1 |
chr14:24 212 532 | 165 | SINE (Alu) | CHMP4A | Promoter | 1 |
chr14:24 212 532 | 165 | SINE (Alu) | TM9SF1 | Intron | 1 |
chr14:24 212 676 | 166 | SINE (Alu) | CHMP4A | Promoter | 1 |
chr14:24 212 676 | 166 | SINE (Alu) | TM9SF1 | Intron | 1 |
chr14:24 473 726 | 118 | LTR (ERV1) | LOC101927045 | Intron | 2 |
chr14:27 832 046 | 439 | LINE (L1) | MIR3171HG | Intron | 2 |
chr14:30 975 089 | 307 | SINE (Alu) | STRN3 | Intron | 2 |
chr14:35 009 342 | 314 | SINE (Alu) | SRP54 | Intron | 2 |
chr14:37 555 350 | 126 | Retroposon (SVA) | MIPOL1 | Intron | 2 |
chr14:37 890 416 | 335 | SINE (Alu) | TTC6 | Intron | 2 |
chr14:39 405 877 | 2 984 | LINE (L1) | FBXO33 | Intron | 2 |
chr14:39 843 742 | 321 | SINE (Alu) | LOC105370462 | Intron | 2 |
chr14:40 110 466 | 331 | SINE (Alu) | LOC105370462 | Intron | 2 |
chr14:40 123 223 | 131 | SINE (Alu) | LOC105370462 | Intron | 2 |
chr14:51 252 267 | 312 | SINE (Alu) | TMX1 | Intron | 2 |
chr14:51 349 610 | 337 | SINE (Alu) | LINC00640 | Intron | 2 |
chr14:52 123 272 | 130 | LTR (ERV1) | LINC02319 | Intron | 2 |
chr14:52 837 362 | 56 | LTR (ERV1) | LOC105370500 | Intron | 2 |
chr14:53 311 386 | 324 | SINE (Alu) | LOC105370502 | Intron | 2 |
chr14:55 329 133 | 320 | SINE (Alu) | FBXO34 | Intron | 2 |
chr14:57 041 271 | 330 | SINE (Alu) | OTX2-AS1 | Intron | 2 |
chr14:59 055 705 | 1 047 | LINE (L1) | LOC107984642 | Intron | 2 |
chr14:62 754 961 | 313 | SINE (Alu) | KCNH5 | Intron | 2 |
chr14:62 759 564 | 335 | SINE (Alu) | KCNH5 | Intron | 2 |
chr14:64 038 275 | 388 | Retroposon (SVA) | SYNE2 | Intron | 2 |
chr14:66 467 727 | 321 | SINE (Alu) | CCDC196 | Intron | 2 |
chr14:66 703 612 | 283 | LINE (L1) | GPHN | Intron | 2 |
chr14:70 397 965 | 57 | LTR (ERV1) | SYNJ2BP-COX16 | Intron | 2 |
chr14:70 813 500 | 128 | SINE (Alu) | MAP3K9-DT | Intron | 2 |
chr14:73 353 583 | 134 | SINE (Alu) | NUMB | Intron | 2 |
chr14:73 535 545 | 1 418 | LTR (ERV1) | HEATR4 | Intron | 1 |
chr14:73 535 995 | 719 | LTR (ERV1) | HEATR4 | Intron | 1 |
chr14:73 546 923 | 185 | SINE (Alu) | HEATR4 | Intron | 2 |
chr14:73 557 101 | 309 | SINE (Alu) | HEATR4 | Intron | 2 |
chr14:75 729 453 | 1 012 | LINE (L1) | TTLL5 | Intron | 2 |
chr14:76 821 592 | 170 | Retroposon (SVA) | ANGEL1 | Intron | 1 |
chr14:76 821 667 | 172 | Retroposon (SVA) | ANGEL1 | Intron | 1 |
chr14:77 460 456 | 318 | SINE (Alu) | AHSA1 | Intron | 2 |
chr14:78 516 349 | 331 | SINE (Alu) | NRXN3 | Intron | 2 |
chr14:80 488 209 | 1 889 | LINE (L1) | CEP128 | Intron | 2 |
chr14:81 320 428 | 2 691 | Retroposon (SVA) | STON2 | Intron | 2 |
chr14:89 608 202 | 143 | SINE (Alu) | FOXN3 | Intron | 2 |
chr14:89 788 459 | 133 | SINE (Alu) | FOXN3 | Intron | 2 |
chr14:90 718 834 | 322 | SINE (Alu) | TTC7B | Intron | 2 |
chr14:91 649 660 | 317 | SINE (Alu) | CATSPERB | Intron | 2 |
chr14:91 658 708 | 312 | SINE (Alu) | CATSPERB | Intron | 2 |
chr14:93 364 578 | 315 | SINE (Alu) | UNC79 | Intron | 2 |
chr14:100 345 061 | 96 | Retroposon (SVA) | WARS1 | Intron | 2 |
chr14:102 676 504 | 171 | Retroposon (SVA) | RCOR1 | Intron | 2 |
chr15:22 584 265 | 135 | SINE (Alu) | HERC2P2 | Intron | 2 |
chr15:24 892 516 | 91 | SINE (Alu) | PWRN1 | Intron | 2 |
chr15:25 758 509 | 1 459 | LTR (ERV1) | ATP10A | Intron | 1 |
chr15:26 627 364 | 329 | SINE (Alu) | GABRB3 | Intron | 2 |
chr15:30 674 565 | 187 | SINE (Alu) | LOC100288637 | Intron | 1 |
chr15:34 346 663 | 82 | SINE (Alu) | NUTM1 | Intron | 2 |
chr15:35 656 775 | 51 | Retroposon (SVA) | DPH6-DT | Intron | 2 |
chr15:35 804 106 | 309 | SINE (Alu) | DPH6-DT | Intron | 2 |
chr15:39 894 051 | 97 | Retroposon (SVA) | GPR176 | Intron | 2 |
chr15:40 631 295 | 709 | LINE (L1) | KNL1 | Intron | 2 |
chr15:40 808 119 | 315 | SINE (Alu) | ZFYVE19 | Promoter | 2 |
chr15:40 808 119 | 315 | SINE (Alu) | ZFYVE19 | Intron | 2 |
chr15:43 076 804 | 126 | Retroposon (SVA) | UBR1 | Intron | 2 |
chr15:44 531 316 | 302 | SINE (Alu) | EIF3J-DT | Intron | 2 |
chr15:45 277 713 | 311 | SINE (Alu) | SLC28A2-AS1 | Intron | 2 |
chr15:45 833 789 | 325 | SINE (Alu) | LOC105370802 | Intron | 2 |
chr15:47 215 130 | 6 055 | LINE (L1) | SEMA6D | Intron | 2 |
chr15:47 279 101 | 87 | LINE (L1) | SEMA6D | Intron | 2 |
chr15:51 294 564 | 66 | Retroposon (SVA) | CYP19A1 | Intron | 2 |
chr15:54 508 181 | 314 | SINE (Alu) | UNC13C | Intron | 2 |
chr15:55 301 465 | 306 | SINE (Alu) | RAB27A | Intron | 2 |
chr15:55 303 250 | 176 | Retroposon (SVA) | RAB27A | Intron | 2 |
chr15:60 365 043 | 330 | SINE (Alu) | ANXA2 | Intron | 2 |
chr15:62 026 065 | 327 | SINE (Alu) | VPS13C | Intron | 2 |
chr15:66 375 798 | 323 | SINE (Alu) | TIPIN | Intron | 2 |
chr15:67 002 508 | 312 | SINE (Alu) | LOC102723493 | Promoter | 2 |
chr15:67 002 508 | 312 | SINE (Alu) | LOC102723493 | Intron | 2 |
chr15:67 352 555 | 318 | SINE (Alu) | IQCH | Intron | 2 |
chr15:68 395 669 | 4 447 | LINE (L1) | ITGA11 | Intron | 2 |
chr15:71 757 533 | 133 | SINE (Alu) | THSD4 | Intron | 2 |
chr15:71 768 925 | 176 | Retroposon (SVA) | THSD4 | Intron | 1 |
chr15:71 769 394 | 126 | Retroposon (SVA) | THSD4 | Intron | 2 |
chr15:72 347 195 | 318 | SINE (Alu) | HEXA | Promoter | 2 |
chr15:72 347 195 | 318 | SINE (Alu) | LOC105370887 | Intron | 2 |
chr15:75 481 586 | 401 | Retroposon (SVA) | PTPN9 | Intron | 2 |
chr15:75 503 575 | 196 | Retroposon (SVA) | PTPN9 | Intron | 2 |
chr15:76 533 663 | 281 | SINE (Alu) | SCAPER | Intron | 2 |
chr15:78 132 275 | 164 | SINE (Alu) | CIB2 | Promoter | 2 |
chr15:78 132 275 | 164 | SINE (Alu) | IDH3A | Intron | 2 |
chr15:78 520 843 | 147 | Retroposon (SVA) | HYKK | Intron | 2 |
chr15:78 644 312 | 318 | SINE (Alu) | CHRNB4 | Intron | 2 |
chr15:80 355 807 | 93 | SINE (Alu) | ARNT2-DT | Intron | 2 |
chr15:81 100 243 | 313 | SINE (Alu) | CFAP161 | Intron | 2 |
chr15:81 743 314 | 325 | SINE (Alu) | LOC102723985 | Intron | 2 |
chr15:85 444 567 | 334 | SINE (Alu) | AKAP13 | Intron | 2 |
chr15:85 681 718 | 325 | SINE (Alu) | AKAP13 | Promoter | 2 |
chr15:85 681 718 | 325 | SINE (Alu) | AKAP13 | Intron | 2 |
chr15:89 854 810 | 78 | Retroposon (SVA) | AP3S2 | Intron | 2 |
chr15:92 768 257 | 99 | Retroposon (SVA) | FAM174B | Intron | 1 |
chr15:93 023 921 | 318 | SINE (Alu) | CHD2 | Intron | 2 |
chr15:93 292 547 | 315 | SINE (Alu) | LOC105370982 | Intron | 2 |
chr15:97 656 736 | 1 101 | LINE (L1) | LINC00923 | Intron | 2 |
chr15:98 079 273 | 885 | LINE (L1) | LINC02251 | Intron | 2 |
chr15:100 270 770 | 308 | SINE (Alu) | ADAMTS17 | Intron | 2 |
chr15:100 272 594 | 328 | SINE (Alu) | ADAMTS17 | Intron | 2 |
chr16:1 599 474 | 808 | Retroposon (SVA) | LOC105371046 | Intron | 2 |
chr16:3 039 306 | 321 | SINE (Alu) | MMP25-AS1 | Intron | 2 |
chr16:4 759 340 | 329 | SINE (Alu) | ZNF500 | Promoter | 2 |
chr16:4 759 340 | 329 | SINE (Alu) | ZNF500 | Intron | 2 |
chr16:5 202 288 | 126 | Retroposon (SVA) | LOC105371067 | Intron | 2 |
chr16:5 202 599 | 50 | Retroposon (SVA) | LOC105371067 | Intron | 1 |
chr16:5 202 929 | 301 | Retroposon (SVA) | LOC105371067 | Intron | 2 |
chr16:5 295 016 | 320 | SINE (Alu) | RBFOX1 | Intron | 2 |
chr16:6 743 824 | 1 436 | LINE (L1) | RBFOX1 | Intron | 2 |
chr16:6 839 146 | 326 | SINE (Alu) | RBFOX1 | Intron | 2 |
chr16:7 176 224 | 324 | SINE (Alu) | RBFOX1 | Intron | 2 |
chr16:7 491 379 | 303 | SINE (Alu) | RBFOX1 | Intron | 2 |
chr16:10 992 534 | 314 | SINE (Alu) | CLEC16A | Intron | 2 |
chr16:11 335 939 | 321 | Retroposon (SVA) | LOC105371082 | Intron | 1 |
chr16:13 437 866 | 56 | SINE (Alu) | SHISA9 | Intron | 2 |
chr16:15 399 099 | 313 | SINE (Alu) | MPV17L | Intron | 2 |
chr16:16 168 217 | 86 | SINE (Alu) | ABCC6 | Intron | 2 |
chr16:19 506 178 | 318 | SINE (Alu) | GDE1 | Intron | 2 |
chr16:23 853 965 | 324 | SINE (Alu) | PRKCB | Intron | 2 |
chr16:24 109 273 | 326 | Retroposon (SVA) | PRKCB | Intron | 2 |
chr16:24 109 273 | 629 | Retroposon (SVA) | PRKCB | Intron | 2 |
chr16:24 316 243 | 316 | SINE (Alu) | CACNG3 | Intron | 2 |
chr16:31 105 127 | 147 | Retroposon (SVA) | BCKDK | Promoter | 2 |
chr16:53 841 055 | 324 | SINE (Alu) | FTO | Intron | 2 |
chr16:56 739 403 | 857 | Retroposon (SVA) | NUP93 | Intron | 1 |
chr16:59 942 554 | 319 | SINE (Alu) | LINC02141 | Intron | 2 |
chr16:60 007 227 | 320 | SINE (Alu) | LINC02141 | Intron | 2 |
chr16:65 448 283 | 314 | SINE (Alu) | LINC00922 | Intron | 2 |
chr16:69 820 423 | 53 | SINE (Alu) | WWP2 | Intron | 2 |
chr16:70 167 766 | 89 | SINE (Alu) | LOC400541 | Intron | 2 |
chr16:71 733 509 | 74 | SINE (Alu) | AP1G1 | Intron | 2 |
chr16:72 695 339 | 1 629 | LINE (L1) | ZFHX3-AS1 | Intron | 2 |
chr16:77 196 294 | 314 | SINE (Alu) | MON1B | Intron | 2 |
chr16:77 806 370 | 134 | SINE (Alu) | VAT1L | Intron | 1 |
chr16:78 658 928 | 323 | SINE (Alu) | WWOX | Intron | 2 |
chr16:80 183 526 | 321 | SINE (Alu) | DYNLRB2-AS1 | Intron | 2 |
chr16:80 663 083 | 326 | SINE (Alu) | CDYL2 | Intron | 2 |
chr16:80 963 376 | 312 | SINE (Alu) | ARLNC1 | Intron | 2 |
chr16:81 244 406 | 311 | SINE (Alu) | BCO1 | Intron | 2 |
chr16:82 131 072 | 299 | SINE (Alu) | HSD17B2-AS1 | Intron | 2 |
chr16:82 878 496 | 321 | SINE (Alu) | CDH13 | Intron | 2 |
chr16:83 632 754 | 332 | SINE (Alu) | CDH13 | Intron | 2 |
chr16:84 226 714 | 334 | SINE (Alu) | KCNG4 | Intron | 2 |
chr16:85 075 085 | 330 | SINE (Alu) | KIAA0513 | Intron | 2 |
chr16:88 462 841 | 334 | SINE (Alu) | ZFPM1 | Intron | 2 |
chr16:89 224 966 | 334 | SINE (Alu) | ZNF778 | Intron | 2 |
chr16:89 617 671 | 350 | SINE (Alu) | DPEP1 | Intron | 2 |
chr17:2 448 181 | 125 | Retroposon (SVA) | METTL16 | Intron | 2 |
chr17:3 544 157 | 132 | SINE (Alu) | TRPV3 | Intron | 2 |
chr17:4 132 659 | 134 | SINE (Alu) | ZZEF1 | Intron | 2 |
chr17:5 516 069 | 324 | SINE (Alu) | NLRP1 | Intron | 2 |
chr17:9 269 002 | 134 | SINE (Alu) | STX8 | Intron | 2 |
chr17:10 175 248 | 317 | SINE (Alu) | GAS7 | Intron | 2 |
chr17:11 972 687 | 60 | LTR (ERV1) | ZNF18 | Intron | 2 |
chr17:13 533 513 | 296 | SINE (Alu) | HS3ST3A1 | Intron | 2 |
chr17:13 896 324 | 312 | SINE (Alu) | COX10-DT | Intron | 2 |
chr17:16 095 666 | 104 | Retroposon (SVA) | NCOR1 | Intron | 2 |
chr17:16 330 605 | 317 | SINE (Alu) | PIGL | Intron | 2 |
chr17:16 630 887 | 1 318 | Retroposon (SVA) | ZNF624 | Intron | 2 |
chr17:16 699 504 | 133 | SINE (Alu) | CCDC144A | Intron | 2 |
chr17:16 769 810 | 318 | SINE (Alu) | CCDC144A | Intron | 2 |
chr17:18 430 192 | 327 | SINE (Alu) | KRT17P2 | Promoter | 2 |
chr17:18 430 192 | 327 | SINE (Alu) | KRT17P2 | Intron | 2 |
chr17:18 888 562 | 354 | Retroposon (SVA) | PRPSAP2 | Intron | 2 |
chr17:19 627 935 | 524 | Retroposon (SVA) | SLC47A1P2 | Intron | 2 |
chr17:21 292 724 | 121 | SINE (Alu) | MAP2K3 | Intron | 2 |
chr17:28 456 137 | 1 158 | Retroposon (SVA) | RSKR | Intron | 2 |
chr17:28 604 078 | 97 | Retroposon (SVA) | SPAG5-AS1 | Intron | 2 |
chr17:30 071 289 | 1 212 | LINE (L1) | EFCAB5 | Intron | 2 |
chr17:30 736 333 | 760 | Retroposon (SVA) | SUZ12P1 | Intron | 2 |
chr17:32 310 717 | 169 | SINE (Alu) | RHBDL3 | Intron | 2 |
chr17:32 318 457 | 185 | SINE (Alu) | RHBDL3 | Intron | 2 |
chr17:32 566 829 | 309 | SINE (Alu) | MYO1D | Intron | 2 |
chr17:38 594 628 | 318 | SINE (Alu) | SRCIN1 | Intron | 2 |
chr17:40 186 588 | 310 | SINE (Alu) | RAPGEFL1 | Intron | 2 |
chr17:42 973 221 | 273 | Retroposon (SVA) | PTGES3L-AARSD1 | Intron | 2 |
chr17:45 583 232 | 3 267 | Retroposon (SVA) | LRRC37A4P | Intron | 2 |
chr17:47 325 026 | 261 | SINE (Alu) | ITGB3 | Intron | 2 |
chr17:48 427 626 | 323 | SINE (Alu) | SKAP1 | Intron | 2 |
chr17:51 452 021 | 304 | SINE (Alu) | LINC02072 | Intron | 2 |
chr17:56 870 207 | 293 | SINE (Alu) | TRIM25 | Intron | 2 |
chr17:61 908 813 | 311 | SINE (Alu) | INTS2 | Intron | 2 |
chr17:62 996 973 | 190 | SINE (Alu) | TANC2 | Intron | 2 |
chr17:63 488 528 | 290 | SINE (Alu) | ACE | Intron | 2 |
chr17:63 654 314 | 314 | SINE (Alu) | MAP3K3 | Intron | 2 |
chr17:72 700 020 | 318 | SINE (Alu) | SLC39A11 | Intron | 2 |
chr17:72 701 862 | 139 | SINE (Alu) | SLC39A11 | Intron | 2 |
chr17:81 146 946 | 326 | SINE (Alu) | AATK | Intron | 2 |
chr17:82 631 585 | 304 | SINE (Alu) | WDR45B | Intron | 2 |
chr17:362 087 | 160 | LTR (ERV1) | RPH3AL | Intron | 2 |
chr17:572 391 | 97 | Retroposon (SVA) | VPS53 | Intron | 2 |
chr17:598 865 | 418 | Retroposon (SVA) | VPS53 | Intron | 2 |
chr17:598 886 | 273 | Retroposon (SVA) | VPS53 | Intron | 1 |
chr18:1 235 775 | 321 | SINE (Alu) | LOC105371953 | Intron | 2 |
chr18:10 911 126 | 315 | SINE (Alu) | PIEZO2 | Intron | 2 |
chr18:12 615 769 | 330 | SINE (Alu) | SPIRE1 | Intron | 2 |
chr18:21 986 488 | 321 | SINE (Alu) | LINC01900 | Intron | 2 |
chr18:23 577 366 | 155 | LTR (ERV1) | NPC1 | Promoter | 2 |
chr18:23 577 366 | 155 | LTR (ERV1) | NPC1 | Intron | 2 |
chr18:26 958 048 | 318 | SINE (Alu) | AQP4-AS1 | Intron | 2 |
chr18:32 609 840 | 316 | SINE (Alu) | LOC112268208 | Intron | 2 |
chr18:41 355 349 | 314 | SINE (Alu) | LOC105372083 | Intron | 2 |
chr18:48 347 264 | 57 | SINE (Alu) | ZBTB7C | Intron | 2 |
chr18:52 405 374 | 324 | SINE (Alu) | DCC | Intron | 2 |
chr18:53 460 168 | 322 | SINE (Alu) | DCC | Intron | 2 |
chr18:55 478 829 | 318 | SINE (Alu) | MIR4529 | Promoter | 2 |
chr18:55 478 829 | 318 | SINE (Alu) | TCF4-AS1 | Intron | 2 |
chr18:56 689 827 | 330 | SINE (Alu) | WDR7 | Intron | 2 |
chr18:57 632 891 | 275 | Retroposon (SVA) | ATP8B1-AS1 | Intron | 2 |
chr18:57 633 005 | 450 | Retroposon (SVA) | ATP8B1-AS1 | Intron | 2 |
chr18:57 642 304 | 305 | LTR (ERV1) | ATP8B1-AS1 | Intron | 1 |
chr18:57 642 408 | 101 | LTR (ERV1) | ATP8B1-AS1 | Intron | 1 |
chr18:57 713 755 | 143 | SINE (Alu) | LOC105372141 | Intron | 2 |
chr18:59 482 874 | 313 | SINE (Alu) | CCBE1 | Intron | 2 |
chr18:65 820 032 | 317 | SINE (Alu) | CDH7 | Intron | 2 |
chr18:68 731 923 | 315 | SINE (Alu) | CCDC102B | Intron | 2 |
chr18:68 905 255 | 332 | SINE (Alu) | CCDC102B | Intron | 2 |
chr18:74 269 351 | 63 | LINE (L2) | CYB5A | Intron | 2 |
chr18:76 241 968 | 322 | SINE (Alu) | LOC105372209 | Intron | 2 |
chr18:76 851 081 | 311 | SINE (Alu) | ZNF236 | Promoter | 2 |
chr18:76 851 081 | 311 | SINE (Alu) | ZNF236 | Intron | 2 |
chr18:77 044 930 | 317 | SINE (Alu) | MBP | Intron | 2 |
chr18:390 833 | 327 | SINE (Alu) | COLEC12 | Intron | 2 |
chr19:2 559 735 | 124 | SINE (Alu) | GNG7 | Intron | 2 |
chr19:3 287 347 | 319 | SINE (Alu) | CELF5 | Intron | 2 |
chr19:5 761 462 | 154 | LTR (ERVL) | CATSPERD | Intron | 2 |
chr19:5 857 371 | 69 | LTR (ERV1) | LOC101928844 | Intron | 2 |
chr19:6 355 382 | 75 | Retroposon (SVA) | ACER1 | Intron | 2 |
chr19:6 923 838 | 323 | SINE (Alu) | ADGRE1 | Intron | 2 |
chr19:7 739 124 | 316 | SINE (Alu) | CLEC4G | Intron | 2 |
chr19:8 896 255 | 304 | SINE (Alu) | MUC16 | Promoter | 2 |
chr19:8 896 255 | 304 | SINE (Alu) | MUC16 | Intron | 2 |
chr19:10 337 271 | 310 | SINE (Alu) | ICAM3 | Intron | 2 |
chr19:12 621 713 | 307 | Retroposon (SVA) | ZNF791 | Intron | 2 |
chr19:17 094 112 | 146 | SINE (Alu) | MYO9B | Intron | 2 |
chr19:17 722 278 | 164 | SINE (Alu) | MAP1S | Intron | 2 |
chr19:18 724 788 | 2 834 | Retroposon (SVA) | CRTC1 | Intron | 2 |
chr19:20 149 557 | 148 | Retroposon (SVA) | LOC105372310 | Intron | 2 |
chr19:20 437 085 | 77 | LTR (ERVL) | LOC105372317 | Intron | 2 |
chr19:20 563 164 | 316 | SINE (Alu) | LOC105372316 | Intron | 2 |
chr19:21 577 498 | 319 | SINE (Alu) | LOC101929007 | Intron | 2 |
chr19:21 577 658 | 145 | SINE (Alu) | LOC101929007 | Intron | 2 |
chr19:21 583 747 | 301 | SINE (Alu) | LOC101929007 | Intron | 1 |
chr19:23 768 604 | 321 | SINE (Alu) | RPSAP58 | Intron | 2 |
chr19:23 828 482 | 1 553 | Retroposon (SVA) | RPSAP58 | Intron | 2 |
chr19:23 845 118 | 2 428 | Retroposon (SVA) | RPSAP58 | Intron | 2 |
chr19:31 199 763 | 354 | SINE (Alu) | LINC01791 | Intron | 2 |
chr19:35 905 651 | 317 | SINE (Alu) | TYROBP | Intron | 2 |
chr19:36 480 621 | 312 | SINE (Alu) | ZNF566 | Intron | 2 |
chr19:38 269 830 | 114 | SINE (Alu) | SPINT2 | Intron | 2 |
chr19:38 541 449 | 134 | SINE (Alu) | RYR1 | Intron | 2 |
chr19:39 905 477 | 312 | SINE (Alu) | FCGBP | Intron | 2 |
chr19:52 720 518 | 73 | Retroposon (SVA) | ZNF611 | Intron | 2 |
chr19:55 064 841 | 306 | SINE (Alu) | RDH13 | Promoter | 2 |
chr19:55 064 841 | 306 | SINE (Alu) | RDH13 | Intron | 2 |
chr19:56 454 674 | 316 | SINE (Alu) | ZNF667 | Intron | 2 |
chr20:1 149 836 | 155 | SINE (Alu) | PSMF1 | Intron | 2 |
chr20:2 271 514 | 272 | SINE (Alu) | TGM3 | Intron | 2 |
chr20:3 261 760 | 311 | SINE (Alu) | DNAAF9 | Intron | 2 |
chr20:8 689 955 | 304 | SINE (Alu) | PLCB1 | Intron | 2 |
chr20:9 641 462 | 118 | LTR (ERV1) | PAK5 | Intron | 2 |
chr20:11 300 930 | 123 | LINE (L1) | LOC339593 | Intron | 2 |
chr20:15 107 012 | 324 | SINE (Alu) | MACROD2 | Intron | 2 |
chr20:15 125 949 | 291 | SINE (Alu) | MACROD2 | Intron | 2 |
chr20:16 498 848 | 324 | LINE (L1) | KIF16B | Intron | 2 |
chr20:18 689 894 | 175 | SINE (Alu) | DTD1 | Intron | 2 |
chr20:20 115 291 | 326 | SINE (Alu) | CFAP61 | Intron | 2 |
chr20:25 562 187 | 443 | Retroposon (SVA) | NINL | Intron | 2 |
chr20:30 345 338 | 321 | SINE (Alu) | FAM242A | Intron | 2 |
chr20:35 213 917 | 183 | SINE (Alu) | PROCR | Intron | 2 |
chr20:35 361 226 | 301 | SINE (Alu) | UQCC1 | Intron | 2 |
chr20:35 564 380 | 148 | SINE (Alu) | FER1L4 | Intron | 2 |
chr20:35 870 631 | 323 | SINE (Alu) | PHF20 | Intron | 2 |
chr20:44 676 839 | 2 738 | Retroposon (SVA) | LINC01260 | Intron | 2 |
chr20:47 525 869 | 146 | Retroposon (SVA) | NCOA3 | Intron | 2 |
chr20:47 525 872 | 344 | Retroposon (SVA) | NCOA3 | Intron | 2 |
chr20:47 589 925 | 2 892 | Retroposon (SVA) | NCOA3 | Intron | 2 |
chr20:48 685 898 | 193 | SINE (Alu) | PREX1 | Intron | 2 |
chr20:50 685 661 | 314 | SINE (Alu) | RIPOR3 | Intron | 2 |
chr20:60 439 016 | 75 | LINE (L1) | MIR646HG | Intron | 2 |
chr20:60 600 158 | 76 | LTR (ERVL) | MIR646HG | Intron | 2 |
chr20:63 873 047 | 325 | SINE (Alu) | TPD52L2 | Intron | 2 |
chr21:10 508 068 | 56 | LINE (L1) | BAGE2 | Intron | 2 |
chr21:13 042 671 | 317 | SINE (Alu) | ANKRD30BP2 | Promoter | 1 |
chr21:13 042 671 | 317 | SINE (Alu) | ANKRD30BP2 | Intron | 1 |
chr21:15 556 506 | 387 | LINE (L1) | LOC101927745 | Intron | 2 |
chr21:24 981 909 | 324 | SINE (Alu) | LINC01692 | Intron | 2 |
chr21:27 385 451 | 316 | SINE (Alu) | LOC105372762 | Intron | 2 |
chr21:32 433 906 | 139 | SINE (Alu) | EVA1C | Intron | 2 |
chr21:32 482 930 | 67 | SINE (Alu) | EVA1C | Intron | 2 |
chr21:35 865 629 | 323 | SINE (Alu) | LOC101928269 | Intron | 2 |
chr21:37 632 243 | 323 | SINE (Alu) | KCNJ6 | Intron | 2 |
chr21:37 685 537 | 314 | SINE (Alu) | KCNJ6 | Intron | 2 |
chr21:42 778 574 | 194 | Retroposon (SVA) | LINC01668 | Intron | 1 |
chr21:45 622 445 | 327 | SINE (Alu) | LOC107985485 | Intron | 2 |
chr22:11 849 283 | 125 | LTR (ERV1) | LOC107984037 | Intron | 2 |
chr22:11 860 399 | 311 | SINE (Alu) | LOC107984037 | Intron | 2 |
chr22:17 224 399 | 323 | SINE (Alu) | ADA2 | Intron | 2 |
chr22:17 567 653 | 357 | SINE (Alu) | SLC25A18 | Intron | 2 |
chr22:18 028 745 | 324 | SINE (Alu) | LINC01634 | Promoter | 2 |
chr22:18 106 451 | 286 | LTR (ERVL) | TUBA8 | Intron | 2 |
chr22:18 801 807 | 135 | SINE (Alu) | GGT3P | Intron | 2 |
chr22:19 373 922 | 126 | SINE (Alu) | HIRA | Intron | 2 |
chr22:22 644 845 | 318 | SINE (Alu) | POM121L1P | Promoter | 2 |
chr22:22 644 845 | 318 | SINE (Alu) | GGTLC2 | Intron | 2 |
chr22:24 000 536 | 318 | SINE (Alu) | GSTT4 | Intron | 2 |
chr22:25 071 581 | 97 | SINE (Alu) | KIAA1671 | Intron | 2 |
chr22:26 553 545 | 141 | SINE (Alu) | TPST2 | Intron | 2 |
chr22:26 773 144 | 905 | Retroposon (SVA) | MIATNB | Intron | 2 |
chr22:26 773 195 | 122 | Retroposon (SVA) | MIATNB | Intron | 1 |
chr22:29 676 947 | 51 | LINE (L1) | NF2 | Intron | 2 |
chr22:30 071 804 | 329 | SINE (Alu) | HORMAD2-AS1 | Intron | 2 |
chr22:30 597 422 | 160 | LTR (ERV1) | PES1 | Intron | 2 |
chr22:32 423 938 | 292 | SINE (Alu) | BPIFC | Intron | 2 |
chr22:32 431 424 | 328 | SINE (Alu) | BPIFC | Intron | 2 |
chr22:32 682 036 | 150 | LINE (L2) | SYN3 | Intron | 2 |
chr22:33 132 511 | 315 | SINE (Alu) | LINC01640 | Intron | 2 |
chr22:34 034 608 | 341 | SINE (Alu) | LINC01643 | Intron | 2 |
chr22:40 501 143 | 130 | Retroposon (SVA) | MRTFA | Intron | 2 |
chr22:40 537 218 | 98 | Retroposon (SVA) | MRTFA | Intron | 2 |
chr22:40 537 639 | 559 | Retroposon (SVA) | MRTFA | Intron | 1 |
chr22:41 314 923 | 314 | SINE (Alu) | ZC3H7B | Intron | 2 |
chr22:41 835 230 | 135 | SINE (Alu) | SREBF2-AS1 | Promoter | 2 |
chr22:41 835 230 | 135 | SINE (Alu) | SREBF2 | Intron | 2 |
chr22:42 818 815 | 314 | SINE (Alu) | ARFGAP3 | Intron | 2 |
chr22:43 173 307 | 327 | SINE (Alu) | TTLL12 | Intron | 2 |
chr22:43 928 708 | 1 147 | LINE (L1) | PNPLA3 | Intron | 2 |
chrX:1 270 917 | 182 | SINE (Alu) | CSF2RA | Intron | 2 |
chrX:1 304 189 | 333 | SINE (Alu) | CSF2RA | Intron | 2 |
chrX:1 432 708 | 269 | Retroposon (SVA) | ASMTL | Intron | 1 |
chrX:6 197 434 | 113 | SINE (Alu) | NLGN4X | Intron | 2 |
chrX:7 941 188 | 158 | SINE (Alu) | LOC107985675 | Intron | 2 |
chrX:10 032 829 | 270 | SINE (Alu) | WWC3 | Intron | 2 |
chrX:16 964 930 | 125 | Retroposon (SVA) | REPS2 | Intron | 2 |
chrX:19 074 340 | 54 | SINE (Alu) | ADGRG2 | Intron | 2 |
chrX:24 709 090 | 129 | Retroposon (SVA) | POLA1 | Intron | 2 |
chrX:29 333 929 | 49 | Retroposon (SVA) | IL1RAPL1 | Intron | 2 |
chrX:34 249 205 | 395 | LINE (L1) | LOC105373153 | Intron | 2 |
chrX:40 080 060 | 337 | SINE (Alu) | BCOR | Intron | 2 |
chrX:45 040 274 | 164 | Retroposon (SVA) | KDM6A | Intron | 2 |
chrX:65 457 297 | 346 | Retroposon (SVA) | ZC3H12B | Intron | 2 |
chrX:68 326 721 | 624 | Retroposon (SVA) | OPHN1 | Intron | 2 |
chrX:70 350 008 | 116 | Retroposon (SVA) | KIF4A | Intron | 2 |
chrX:72 681 506 | 126 | Retroposon (SVA) | PHKA1 | Intron | 2 |
chrX:80 396 883 | 836 | Retroposon (SVA) | TENT5D | Intron | 2 |
chrX:84 080 389 | 1 362 | LINE (L1) | RPS6KA6 | Intron | 2 |
chrX:92 170 920 | 135 | SINE (Alu) | PCDH11X | Intron | 2 |
chrX:96 282 339 | 318 | SINE (Alu) | LOC105373294 | Intron | 2 |
chrX:100 972 832 | 761 | Retroposon (SVA) | ARL13A | Intron | 2 |
chrX:105 239 587 | 148 | LTR (ERV1) | IL1RAPL2 | Intron | 2 |
chrX:107 501 516 | 133 | SINE (Alu) | FRMPD3 | Intron | 2 |
chrX:112 314 520 | 6 057 | LINE (L1) | RTL4 | Intron | 2 |
chrX:118 888 886 | 67 | LTR (ERV1) | LINC01285 | Intron | 2 |
chrX:124 128 746 | 222 | Retroposon (SVA) | STAG2 | Intron | 2 |
chrX:128 450 745 | 54 | LTR (ERVL) | LOC107985698 | Intron | 2 |
chrX:131 787 913 | 310 | SINE (Alu) | FIRRE | Intron | 2 |
chrX:147 231 728 | 107 | LINE (L1) | MIR506 | Promoter | 1 |
chrX:147 231 728 | 107 | LINE (L1) | LOC105373347 | Intron | 1 |
chrX:147 992 453 | 778 | Retroposon (SVA) | FMR1NB | Intron | 2 |
chrX:152 833 245 | 315 | SINE (Alu) | NSDHL | Intron | 2 |
Position | Length | Type | Gene | Annotation | Occurrences |
|---|---|---|---|---|---|
chr1:240 512 502 | 176 | DNA (hAT) | GREM2 | Intron | 2 |
chr3:197 847 677 | 57 | DNA (TcMar) | LRCH3 | Promoter | 2 |
chr3:197 847 677 | 57 | DNA (TcMar) | LRCH3 | Intron | 2 |
chr5:177 779 712 | 93 | DNA (TcMar) | FAM153A | Intron | 2 |
chr8:2 174 153 | 263 | DNA (hAT) | LOC105377781 | Intron | 2 |
chr10:35 373 887 | 112 | DNA (TcMar) | CCNY | Intron | 2 |
chr11:41 072 280 | 87 | DNA (TcMar) | LRRC4C | Intron | 2 |
It is common to find deletions whose coordinates match those of a TE sequence in the reference genome. This section presents them.
Allele frequency is shown for TE deletions for each chromosome. Each dot marks a different deletion.
This section shows the result of enrichment analysis on the genes affected with TE insertions.
Barplot for enriched categories. Values on top have lower p values.
The category with lowest p value is NADP-retinol dehydrogenase activity (2.347664e-05), and the highest (among the lowest 10) is glucuronosyltransferase activity (0.001573591). The ratio is 67.02796, i.e., they differ in 1 orders of magnitude.
ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | Count | GeneRatioCalc |
|---|---|---|---|---|---|---|---|---|
GO:0052650 | NADP-retinol dehydrogenase activity | 10/905 | 24/20758 | 2.653e-08 | 2.348e-05 | 2.103e-05 | 10 | 0.01105 |
GO:0005096 | GTPase activator activity | 35/905 | 304/20758 | 1.717e-07 | 7.597e-05 | 6.804e-05 | 35 | 0.03867 |
GO:0005085 | guanyl-nucleotide exchange factor activity | 30/905 | 245/20758 | 3.453e-07 | 0.0001018 | 9.122e-05 | 30 | 0.03315 |
GO:0004033 | aldo-keto reductase (NADP) activity | 11/905 | 41/20758 | 9.667e-07 | 0.0002109 | 0.0001889 | 11 | 0.01215 |
GO:0008106 | alcohol dehydrogenase (NADP+) activity | 10/905 | 34/20758 | 1.192e-06 | 0.0002109 | 0.0001889 | 10 | 0.01105 |
GO:0005516 | calmodulin binding | 26/905 | 210/20758 | 1.672e-06 | 0.0002466 | 0.0002208 | 26 | 0.02873 |
GO:0042578 | phosphoric ester hydrolase activity | 37/905 | 396/20758 | 1.179e-05 | 0.001491 | 0.001335 | 37 | 0.04088 |
GO:0046979 | TAP2 binding | 7/905 | 20/20758 | 1.377e-05 | 0.001523 | 0.001364 | 7 | 0.007735 |
GO:0022836 | gated channel activity | 35/905 | 372/20758 | 1.74e-05 | 0.001574 | 0.001409 | 35 | 0.03867 |
GO:0015020 | glucuronosyltransferase activity | 9/905 | 36/20758 | 1.778e-05 | 0.001574 | 0.001409 | 9 | 0.009945 |
GO:0003779 | actin binding | 41/905 | 471/20758 | 2.2e-05 | 0.001666 | 0.001492 | 41 | 0.0453 |
GO:0071889 | 14-3-3 protein binding | 9/905 | 37/20758 | 2.259e-05 | 0.001666 | 0.001492 | 9 | 0.009945 |
GO:0035091 | phosphatidylinositol binding | 29/905 | 288/20758 | 2.609e-05 | 0.001776 | 0.001591 | 29 | 0.03204 |
GO:0005543 | phospholipid binding | 42/905 | 495/20758 | 3.198e-05 | 0.002006 | 0.001797 | 42 | 0.04641 |
GO:0005216 | ion channel activity | 41/905 | 480/20758 | 3.401e-05 | 0.002006 | 0.001797 | 41 | 0.0453 |
GO:0016757 | glycosyltransferase activity | 28/905 | 289/20758 | 7.07e-05 | 0.00391 | 0.003502 | 28 | 0.03094 |
GO:0030881 | beta-2-microglobulin binding | 7/905 | 26/20758 | 9.288e-05 | 0.004759 | 0.004262 | 7 | 0.007735 |
GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 18/905 | 150/20758 | 9.679e-05 | 0.004759 | 0.004262 | 18 | 0.01989 |
GO:0016758 | hexosyltransferase activity | 22/905 | 210/20758 | 0.0001341 | 0.006245 | 0.005594 | 22 | 0.02431 |
GO:0008194 | UDP-glycosyltransferase activity | 18/905 | 157/20758 | 0.0001738 | 0.007689 | 0.006887 | 18 | 0.01989 |
GO:0046978 | TAP1 binding | 7/905 | 29/20758 | 0.0001966 | 0.008284 | 0.007419 | 7 | 0.007735 |
GO:0070679 | inositol 1,4,5 trisphosphate binding | 5/905 | 14/20758 | 0.0002243 | 0.009025 | 0.008083 | 5 | 0.005525 |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | 18/905 | 162/20758 | 0.0002575 | 0.009909 | 0.008875 | 18 | 0.01989 |
GO:0031267 | small GTPase binding | 27/905 | 297/20758 | 0.0002691 | 0.009922 | 0.008887 | 27 | 0.02983 |
GO:0004721 | phosphoprotein phosphatase activity | 20/905 | 194/20758 | 0.0003286 | 0.01163 | 0.01042 | 20 | 0.0221 |
GO:0005262 | calcium channel activity | 15/905 | 126/20758 | 0.0003922 | 0.01335 | 0.01196 | 15 | 0.01657 |
GO:0022843 | voltage-gated cation channel activity | 17/905 | 156/20758 | 0.0004742 | 0.01501 | 0.01345 | 17 | 0.01878 |
GO:0015085 | calcium ion transmembrane transporter activity | 16/905 | 142/20758 | 0.000475 | 0.01501 | 0.01345 | 16 | 0.01768 |
GO:0005261 | cation channel activity | 30/905 | 360/20758 | 0.0005576 | 0.01702 | 0.01524 | 30 | 0.03315 |
GO:0051020 | GTPase binding | 28/905 | 329/20758 | 0.0006054 | 0.01786 | 0.01599 | 28 | 0.03094 |
GO:0008266 | poly(U) RNA binding | 6/905 | 26/20758 | 0.0007344 | 0.02096 | 0.01878 | 6 | 0.00663 |
GO:0015278 | calcium-release channel activity | 5/905 | 18/20758 | 0.0008301 | 0.02236 | 0.02003 | 5 | 0.005525 |
GO:0005080 | protein kinase C binding | 9/905 | 58/20758 | 0.0008526 | 0.02236 | 0.02003 | 9 | 0.009945 |
GO:0008081 | phosphoric diester hydrolase activity | 12/905 | 95/20758 | 0.0008592 | 0.02236 | 0.02003 | 12 | 0.01326 |
GO:0015276 | ligand-gated ion channel activity | 16/905 | 152/20758 | 0.001001 | 0.02442 | 0.02187 | 16 | 0.01768 |
GO:0022834 | ligand-gated channel activity | 16/905 | 152/20758 | 0.001001 | 0.02442 | 0.02187 | 16 | 0.01768 |
GO:0045296 | cadherin binding | 29/905 | 357/20758 | 0.001021 | 0.02442 | 0.02187 | 29 | 0.03204 |
GO:0004115 | 3',5'-cyclic-AMP phosphodiesterase activity | 5/905 | 19/20758 | 0.001086 | 0.0253 | 0.02266 | 5 | 0.005525 |
GO:0004725 | protein tyrosine phosphatase activity | 13/905 | 112/20758 | 0.001188 | 0.02695 | 0.02414 | 13 | 0.01436 |
GO:0043225 | ATPase-coupled inorganic anion transmembrane transporter activity | 4/905 | 12/20758 | 0.001341 | 0.02856 | 0.02558 | 4 | 0.00442 |
GO:0008187 | poly-pyrimidine tract binding | 6/905 | 29/20758 | 0.001355 | 0.02856 | 0.02558 | 6 | 0.00663 |
GO:0045499 | chemorepellent activity | 6/905 | 29/20758 | 0.001355 | 0.02856 | 0.02558 | 6 | 0.00663 |
GO:0050811 | GABA receptor binding | 5/905 | 20/20758 | 0.001397 | 0.02875 | 0.02575 | 5 | 0.005525 |
GO:0032451 | demethylase activity | 7/905 | 40/20758 | 0.001547 | 0.03052 | 0.02734 | 7 | 0.007735 |
GO:0016791 | phosphatase activity | 25/905 | 300/20758 | 0.001552 | 0.03052 | 0.02734 | 25 | 0.02762 |
GO:0070717 | poly-purine tract binding | 6/905 | 30/20758 | 0.001632 | 0.03141 | 0.02813 | 6 | 0.00663 |
GO:0044325 | transmembrane transporter binding | 14/905 | 131/20758 | 0.001749 | 0.03178 | 0.02847 | 14 | 0.01547 |
GO:0005001 | transmembrane receptor protein tyrosine phosphatase activity | 5/905 | 21/20758 | 0.001768 | 0.03178 | 0.02847 | 5 | 0.005525 |
GO:0019198 | transmembrane receptor protein phosphatase activity | 5/905 | 21/20758 | 0.001768 | 0.03178 | 0.02847 | 5 | 0.005525 |
GO:1901981 | phosphatidylinositol phosphate binding | 18/905 | 191/20758 | 0.001796 | 0.03178 | 0.02847 | 18 | 0.01989 |
GO:1902936 | phosphatidylinositol bisphosphate binding | 13/905 | 118/20758 | 0.001916 | 0.0332 | 0.02973 | 13 | 0.01436 |
GO:0005217 | intracellular ligand-gated ion channel activity | 6/905 | 31/20758 | 0.001951 | 0.0332 | 0.02973 | 6 | 0.00663 |
GO:0046873 | metal ion transmembrane transporter activity | 34/905 | 466/20758 | 0.002459 | 0.04106 | 0.03677 | 34 | 0.03757 |
GO:0030215 | semaphorin receptor binding | 5/905 | 24/20758 | 0.003315 | 0.05361 | 0.04801 | 5 | 0.005525 |
GO:0034236 | protein kinase A catalytic subunit binding | 4/905 | 15/20758 | 0.003332 | 0.05361 | 0.04801 | 4 | 0.00442 |
GO:0005245 | voltage-gated calcium channel activity | 7/905 | 46/20758 | 0.003543 | 0.056 | 0.05015 | 7 | 0.007735 |
GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | 5/905 | 26/20758 | 0.004773 | 0.07411 | 0.06638 | 5 | 0.005525 |
GO:0030165 | PDZ domain binding | 10/905 | 89/20758 | 0.005334 | 0.07945 | 0.07116 | 10 | 0.01105 |
GO:0030507 | spectrin binding | 5/905 | 27/20758 | 0.005651 | 0.07945 | 0.07116 | 5 | 0.005525 |
GO:0046703 | natural killer cell lectin-like receptor binding | 5/905 | 27/20758 | 0.005651 | 0.07945 | 0.07116 | 5 | 0.005525 |
GO:0099604 | ligand-gated calcium channel activity | 5/905 | 27/20758 | 0.005651 | 0.07945 | 0.07116 | 5 | 0.005525 |
GO:0046977 | TAP binding | 7/905 | 50/20758 | 0.005691 | 0.07945 | 0.07116 | 7 | 0.007735 |
GO:0005244 | voltage-gated ion channel activity | 18/905 | 213/20758 | 0.005745 | 0.07945 | 0.07116 | 18 | 0.01989 |
GO:0022832 | voltage-gated channel activity | 18/905 | 213/20758 | 0.005745 | 0.07945 | 0.07116 | 18 | 0.01989 |
GO:0098631 | cell adhesion mediator activity | 8/905 | 64/20758 | 0.006454 | 0.08759 | 0.07845 | 8 | 0.00884 |
GO:0004112 | cyclic-nucleotide phosphodiesterase activity | 5/905 | 28/20758 | 0.006637 | 0.08759 | 0.07845 | 5 | 0.005525 |
GO:0003756 | protein disulfide isomerase activity | 4/905 | 18/20758 | 0.00673 | 0.08759 | 0.07845 | 4 | 0.00442 |
GO:0016864 | intramolecular oxidoreductase activity, transposing S-S bonds | 4/905 | 18/20758 | 0.00673 | 0.08759 | 0.07845 | 4 | 0.00442 |
GO:0043178 | alcohol binding | 10/905 | 93/20758 | 0.007259 | 0.09224 | 0.08261 | 10 | 0.01105 |
GO:0005547 | phosphatidylinositol-3,4,5-trisphosphate binding | 6/905 | 40/20758 | 0.007296 | 0.09224 | 0.08261 | 6 | 0.00663 |
GO:0004435 | phosphatidylinositol phospholipase C activity | 5/905 | 29/20758 | 0.007738 | 0.0929 | 0.0832 | 5 | 0.005525 |
GO:0015431 | ABC-type glutathione S-conjugate transporter activity | 3/905 | 10/20758 | 0.007873 | 0.0929 | 0.0832 | 3 | 0.003315 |
GO:0051864 | histone H3-methyl-lysine-36 demethylase activity | 3/905 | 10/20758 | 0.007873 | 0.0929 | 0.0832 | 3 | 0.003315 |
GO:0070739 | protein-glutamic acid ligase activity | 3/905 | 10/20758 | 0.007873 | 0.0929 | 0.0832 | 3 | 0.003315 |
GO:0070740 | tubulin-glutamic acid ligase activity | 3/905 | 10/20758 | 0.007873 | 0.0929 | 0.0832 | 3 | 0.003315 |
GO:0008569 | minus-end-directed microtubule motor activity | 4/905 | 19/20758 | 0.008235 | 0.0959 | 0.08589 | 4 | 0.00442 |
GO:0098632 | cell-cell adhesion mediator activity | 7/905 | 54/20758 | 0.008688 | 0.0998 | 0.08939 | 7 | 0.007735 |
GO:0032452 | histone demethylase activity | 5/905 | 30/20758 | 0.008959 | 0.0998 | 0.08939 | 5 | 0.005525 |
GO:0140457 | protein demethylase activity | 5/905 | 30/20758 | 0.008959 | 0.0998 | 0.08939 | 5 | 0.005525 |
GO:0005267 | potassium channel activity | 12/905 | 126/20758 | 0.009022 | 0.0998 | 0.08939 | 12 | 0.01326 |
GO:0051018 | protein kinase A binding | 7/905 | 55/20758 | 0.00959 | 0.1048 | 0.09385 | 7 | 0.007735 |
GO:0046790 | virion binding | 3/905 | 11/20758 | 0.01048 | 0.1131 | 0.1013 | 3 | 0.003315 |
GO:0004629 | phospholipase C activity | 5/905 | 32/20758 | 0.01179 | 0.1242 | 0.1112 | 5 | 0.005525 |
GO:0070566 | adenylyltransferase activity | 5/905 | 32/20758 | 0.01179 | 0.1242 | 0.1112 | 5 | 0.005525 |
GO:0005154 | epidermal growth factor receptor binding | 5/905 | 33/20758 | 0.01341 | 0.136 | 0.1218 | 5 | 0.005525 |
GO:0005249 | voltage-gated potassium channel activity | 10/905 | 102/20758 | 0.01352 | 0.136 | 0.1218 | 10 | 0.01105 |
GO:0001851 | complement component C3b binding | 3/905 | 12/20758 | 0.01352 | 0.136 | 0.1218 | 3 | 0.003315 |
GO:0008331 | high voltage-gated calcium channel activity | 3/905 | 12/20758 | 0.01352 | 0.136 | 0.1218 | 3 | 0.003315 |
GO:0031681 | G-protein beta-subunit binding | 4/905 | 22/20758 | 0.01402 | 0.1368 | 0.1225 | 4 | 0.00442 |
GO:0015079 | potassium ion transmembrane transporter activity | 14/905 | 166/20758 | 0.01403 | 0.1368 | 0.1225 | 14 | 0.01547 |
GO:0003774 | cytoskeletal motor activity | 11/905 | 118/20758 | 0.01407 | 0.1368 | 0.1225 | 11 | 0.01215 |
GO:0016247 | channel regulator activity | 13/905 | 150/20758 | 0.01425 | 0.137 | 0.1227 | 13 | 0.01436 |
GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | 7/905 | 60/20758 | 0.01515 | 0.1442 | 0.1291 | 7 | 0.007735 |
GO:0008375 | acetylglucosaminyltransferase activity | 6/905 | 47/20758 | 0.0158 | 0.1487 | 0.1332 | 6 | 0.00663 |
GO:0008093 | cytoskeletal anchor activity | 4/905 | 23/20758 | 0.01639 | 0.1527 | 0.1368 | 4 | 0.00442 |
GO:0099094 | ligand-gated cation channel activity | 11/905 | 122/20758 | 0.01767 | 0.1629 | 0.1459 | 11 | 0.01215 |
GO:1904315 | transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential | 7/905 | 62/20758 | 0.01792 | 0.1635 | 0.1464 | 7 | 0.007735 |
GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | 9/905 | 92/20758 | 0.01884 | 0.1682 | 0.1507 | 9 | 0.009945 |
GO:0051117 | ATPase binding | 9/905 | 92/20758 | 0.01884 | 0.1682 | 0.1507 | 9 | 0.009945 |
GO:0008143 | poly(A) binding | 4/905 | 24/20758 | 0.01901 | 0.1682 | 0.1507 | 4 | 0.00442 |
These plots show connections among categories:
Enrichment map. Categories are connected by genes in common. Dot size indicates number of genes, dot color indicates adjusted p value.
Gene-concept network. Categories (brown dots) are linked by genes in common (gray dots). The size of category dots indicates gene count.
Barplot for enriched categories. Values on top have lower p values.
The category with lowest p value is negative regulation of natural killer cell activation (4.1123e-10), and the highest (among the lowest 10) is regulation of neuron projection development (6.569717e-05). The ratio is 159757.71, i.e., they differ in 5 orders of magnitude.
ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | Count | GeneRatioCalc |
|---|---|---|---|---|---|---|---|---|
GO:0032815 | negative regulation of natural killer cell activation | 13/898 | 20/21069 | 8.268e-14 | 4.112e-10 | 3.834e-10 | 13 | 0.01448 |
GO:0009644 | response to high light intensity | 10/898 | 12/21069 | 1.151e-12 | 2.862e-09 | 2.669e-09 | 10 | 0.01114 |
GO:0043321 | regulation of natural killer cell degranulation | 8/898 | 10/21069 | 4.406e-10 | 5.479e-07 | 5.108e-07 | 8 | 0.008909 |
GO:0043323 | positive regulation of natural killer cell degranulation | 8/898 | 10/21069 | 4.406e-10 | 5.479e-07 | 5.108e-07 | 8 | 0.008909 |
GO:0009642 | response to light intensity | 11/898 | 26/21069 | 3.406e-09 | 3.389e-06 | 3.16e-06 | 11 | 0.01225 |
GO:0043320 | natural killer cell degranulation | 9/898 | 17/21069 | 7.968e-09 | 6.606e-06 | 6.159e-06 | 9 | 0.01002 |
GO:0032814 | regulation of natural killer cell activation | 15/898 | 59/21069 | 1.707e-08 | 1.213e-05 | 1.131e-05 | 15 | 0.0167 |
GO:0042574 | retinal metabolic process | 11/898 | 30/21069 | 2.059e-08 | 1.28e-05 | 1.194e-05 | 11 | 0.01225 |
GO:0051056 | regulation of small GTPase mediated signal transduction | 39/898 | 343/21069 | 2.643e-08 | 1.461e-05 | 1.362e-05 | 39 | 0.04343 |
GO:0010975 | regulation of neuron projection development | 46/898 | 468/21069 | 1.321e-07 | 6.57e-05 | 6.126e-05 | 46 | 0.05122 |
GO:0006063 | uronic acid metabolic process | 10/898 | 29/21069 | 1.801e-07 | 7.464e-05 | 6.96e-05 | 10 | 0.01114 |
GO:0019585 | glucuronate metabolic process | 10/898 | 29/21069 | 1.801e-07 | 7.464e-05 | 6.96e-05 | 10 | 0.01114 |
GO:0010842 | retina layer formation | 11/898 | 37/21069 | 2.45e-07 | 9.373e-05 | 8.74e-05 | 11 | 0.01225 |
GO:0052695 | cellular glucuronidation | 9/898 | 24/21069 | 3.272e-07 | 0.0001162 | 0.0001084 | 9 | 0.01002 |
GO:0045920 | negative regulation of exocytosis | 11/898 | 44/21069 | 1.672e-06 | 0.0005543 | 0.0005169 | 11 | 0.01225 |
GO:0016358 | dendrite development | 29/898 | 262/21069 | 2.74e-06 | 0.0008519 | 0.0007943 | 29 | 0.03229 |
GO:0034329 | cell junction assembly | 42/898 | 468/21069 | 4.858e-06 | 0.001421 | 0.001325 | 42 | 0.04677 |
GO:0042461 | photoreceptor cell development | 12/898 | 60/21069 | 7.068e-06 | 0.001953 | 0.001821 | 12 | 0.01336 |
GO:0042445 | hormone metabolic process | 29/898 | 277/21069 | 8.207e-06 | 0.002148 | 0.002003 | 29 | 0.03229 |
GO:0001523 | retinoid metabolic process | 16/898 | 105/21069 | 9.273e-06 | 0.002306 | 0.00215 | 16 | 0.01782 |
GO:0043301 | negative regulation of leukocyte degranulation | 7/898 | 20/21069 | 1.188e-05 | 0.002814 | 0.002624 | 7 | 0.007795 |
GO:0016101 | diterpenoid metabolic process | 16/898 | 108/21069 | 1.338e-05 | 0.003025 | 0.002821 | 16 | 0.01782 |
GO:0042462 | eye photoreceptor cell development | 10/898 | 45/21069 | 1.543e-05 | 0.003336 | 0.003111 | 10 | 0.01114 |
GO:0002725 | negative regulation of T cell cytokine production | 7/898 | 21/21069 | 1.717e-05 | 0.003558 | 0.003318 | 7 | 0.007795 |
GO:0032816 | positive regulation of natural killer cell activation | 9/898 | 37/21069 | 1.889e-05 | 0.003759 | 0.003505 | 9 | 0.01002 |
GO:0048813 | dendrite morphogenesis | 19/898 | 150/21069 | 2.168e-05 | 0.004149 | 0.003868 | 19 | 0.02116 |
GO:0007265 | Ras protein signal transduction | 35/898 | 392/21069 | 3.278e-05 | 0.005754 | 0.005365 | 35 | 0.03898 |
GO:0043302 | positive regulation of leukocyte degranulation | 8/898 | 31/21069 | 3.472e-05 | 0.005754 | 0.005365 | 8 | 0.008909 |
GO:1903306 | negative regulation of regulated secretory pathway | 8/898 | 31/21069 | 3.472e-05 | 0.005754 | 0.005365 | 8 | 0.008909 |
GO:0006081 | cellular aldehyde metabolic process | 13/898 | 81/21069 | 3.592e-05 | 0.005754 | 0.005365 | 13 | 0.01448 |
GO:0042572 | retinol metabolic process | 12/898 | 70/21069 | 3.634e-05 | 0.005754 | 0.005365 | 12 | 0.01336 |
GO:0002323 | natural killer cell activation involved in immune response | 9/898 | 40/21069 | 3.702e-05 | 0.005754 | 0.005365 | 9 | 0.01002 |
GO:1903531 | negative regulation of secretion by cell | 20/898 | 171/21069 | 4.281e-05 | 0.006453 | 0.006017 | 20 | 0.02227 |
GO:0002477 | antigen processing and presentation of exogenous peptide antigen via MHC class Ib | 7/898 | 24/21069 | 4.568e-05 | 0.006615 | 0.006168 | 7 | 0.007795 |
GO:0034754 | cellular hormone metabolic process | 20/898 | 172/21069 | 4.655e-05 | 0.006615 | 0.006168 | 20 | 0.02227 |
GO:0006721 | terpenoid metabolic process | 16/898 | 121/21069 | 5.613e-05 | 0.007756 | 0.007232 | 16 | 0.01782 |
GO:0051048 | negative regulation of secretion | 22/898 | 203/21069 | 5.856e-05 | 0.007872 | 0.00734 | 22 | 0.0245 |
GO:0046578 | regulation of Ras protein signal transduction | 23/898 | 218/21069 | 6.101e-05 | 0.007985 | 0.007446 | 23 | 0.02561 |
GO:0046530 | photoreceptor cell differentiation | 12/898 | 74/21069 | 6.412e-05 | 0.008178 | 0.007625 | 12 | 0.01336 |
GO:0099173 | postsynapse organization | 20/898 | 183/21069 | 0.0001113 | 0.01365 | 0.01272 | 20 | 0.02227 |
GO:0007605 | sensory perception of sound | 19/898 | 169/21069 | 0.0001125 | 0.01365 | 0.01272 | 19 | 0.02116 |
GO:0035795 | negative regulation of mitochondrial membrane permeability | 7/898 | 28/21069 | 0.0001346 | 0.01594 | 0.01487 | 7 | 0.007795 |
GO:0017157 | regulation of exocytosis | 23/898 | 230/21069 | 0.0001379 | 0.01595 | 0.01487 | 23 | 0.02561 |
GO:0001754 | eye photoreceptor cell differentiation | 10/898 | 58/21069 | 0.0001529 | 0.01608 | 0.01499 | 10 | 0.01114 |
GO:1903307 | positive regulation of regulated secretory pathway | 10/898 | 58/21069 | 0.0001529 | 0.01608 | 0.01499 | 10 | 0.01114 |
GO:0007269 | neurotransmitter secretion | 18/898 | 159/21069 | 0.0001545 | 0.01608 | 0.01499 | 18 | 0.02004 |
GO:0099643 | signal release from synapse | 18/898 | 159/21069 | 0.0001545 | 0.01608 | 0.01499 | 18 | 0.02004 |
GO:0045921 | positive regulation of exocytosis | 13/898 | 93/21069 | 0.0001552 | 0.01608 | 0.01499 | 13 | 0.01448 |
GO:0097120 | receptor localization to synapse | 10/898 | 59/21069 | 0.0001771 | 0.01764 | 0.01645 | 10 | 0.01114 |
GO:0086014 | atrial cardiac muscle cell action potential | 6/898 | 21/21069 | 0.0001844 | 0.01764 | 0.01645 | 6 | 0.006682 |
GO:0086026 | atrial cardiac muscle cell to AV node cell signaling | 6/898 | 21/21069 | 0.0001844 | 0.01764 | 0.01645 | 6 | 0.006682 |
GO:0086066 | atrial cardiac muscle cell to AV node cell communication | 6/898 | 21/21069 | 0.0001844 | 0.01764 | 0.01645 | 6 | 0.006682 |
GO:0035176 | social behavior | 10/898 | 60/21069 | 0.0002045 | 0.0192 | 0.0179 | 10 | 0.01114 |
GO:0006887 | exocytosis | 33/898 | 397/21069 | 0.0002113 | 0.01946 | 0.01815 | 33 | 0.03675 |
GO:0007034 | vacuolar transport | 19/898 | 180/21069 | 0.000257 | 0.02203 | 0.02054 | 19 | 0.02116 |
GO:0045953 | negative regulation of natural killer cell mediated cytotoxicity | 13/898 | 98/21069 | 0.0002642 | 0.02203 | 0.02054 | 13 | 0.01448 |
GO:0099175 | regulation of postsynapse organization | 13/898 | 98/21069 | 0.0002642 | 0.02203 | 0.02054 | 13 | 0.01448 |
GO:0002476 | antigen processing and presentation of endogenous peptide antigen via MHC class Ib | 7/898 | 31/21069 | 0.0002674 | 0.02203 | 0.02054 | 7 | 0.007795 |
GO:1905709 | negative regulation of membrane permeability | 7/898 | 31/21069 | 0.0002674 | 0.02203 | 0.02054 | 7 | 0.007795 |
GO:0051058 | negative regulation of small GTPase mediated signal transduction | 10/898 | 62/21069 | 0.0002701 | 0.02203 | 0.02054 | 10 | 0.01114 |
GO:0051703 | biological process involved in intraspecies interaction between organisms | 10/898 | 62/21069 | 0.0002701 | 0.02203 | 0.02054 | 10 | 0.01114 |
GO:0009812 | flavonoid metabolic process | 5/898 | 15/21069 | 0.0002922 | 0.02309 | 0.02153 | 5 | 0.005568 |
GO:0002716 | negative regulation of natural killer cell mediated immunity | 13/898 | 99/21069 | 0.0002925 | 0.02309 | 0.02153 | 13 | 0.01448 |
GO:0050954 | sensory perception of mechanical stimulus | 20/898 | 197/21069 | 0.0003009 | 0.02338 | 0.0218 | 20 | 0.02227 |
GO:0086012 | membrane depolarization during cardiac muscle cell action potential | 6/898 | 23/21069 | 0.0003189 | 0.0244 | 0.02275 | 6 | 0.006682 |
GO:0030101 | natural killer cell activation | 17/898 | 155/21069 | 0.00034 | 0.02544 | 0.02372 | 17 | 0.01893 |
GO:0006720 | isoprenoid metabolic process | 16/898 | 141/21069 | 0.0003427 | 0.02544 | 0.02372 | 16 | 0.01782 |
GO:0060042 | retina morphogenesis in camera-type eye | 11/898 | 76/21069 | 0.0003603 | 0.02634 | 0.02456 | 11 | 0.01225 |
GO:0099054 | presynapse assembly | 9/898 | 53/21069 | 0.0003654 | 0.02634 | 0.02456 | 9 | 0.01002 |
GO:0031589 | cell-substrate adhesion | 33/898 | 411/21069 | 0.0003947 | 0.02805 | 0.02615 | 33 | 0.03675 |
GO:0002428 | antigen processing and presentation of peptide antigen via MHC class Ib | 7/898 | 33/21069 | 0.0004034 | 0.02826 | 0.02635 | 7 | 0.007795 |
GO:0046580 | negative regulation of Ras protein signal transduction | 9/898 | 55/21069 | 0.0004859 | 0.03357 | 0.0313 | 9 | 0.01002 |
GO:0042391 | regulation of membrane potential | 36/898 | 468/21069 | 0.0004928 | 0.03358 | 0.03131 | 36 | 0.04009 |
GO:0001911 | negative regulation of leukocyte mediated cytotoxicity | 13/898 | 105/21069 | 0.0005223 | 0.03511 | 0.03274 | 13 | 0.01448 |
GO:0099172 | presynapse organization | 9/898 | 56/21069 | 0.0005574 | 0.0353 | 0.03292 | 9 | 0.01002 |
GO:0010727 | negative regulation of hydrogen peroxide metabolic process | 4/898 | 10/21069 | 0.0005601 | 0.0353 | 0.03292 | 4 | 0.004454 |
GO:0099612 | protein localization to axon | 4/898 | 10/21069 | 0.0005601 | 0.0353 | 0.03292 | 4 | 0.004454 |
GO:1900122 | positive regulation of receptor binding | 4/898 | 10/21069 | 0.0005601 | 0.0353 | 0.03292 | 4 | 0.004454 |
GO:0007158 | neuron cell-cell adhesion | 5/898 | 17/21069 | 0.0005607 | 0.0353 | 0.03292 | 5 | 0.005568 |
GO:0035637 | multicellular organismal signaling | 18/898 | 177/21069 | 0.000579 | 0.036 | 0.03357 | 18 | 0.02004 |
GO:0071320 | cellular response to cAMP | 9/898 | 57/21069 | 0.0006372 | 0.03886 | 0.03624 | 9 | 0.01002 |
GO:0045954 | positive regulation of natural killer cell mediated cytotoxicity | 8/898 | 46/21069 | 0.0006524 | 0.03886 | 0.03624 | 8 | 0.008909 |
GO:0099072 | regulation of postsynaptic membrane neurotransmitter receptor levels | 10/898 | 69/21069 | 0.0006533 | 0.03886 | 0.03624 | 10 | 0.01114 |
GO:1903532 | positive regulation of secretion by cell | 26/898 | 305/21069 | 0.0006563 | 0.03886 | 0.03624 | 26 | 0.02895 |
GO:0031342 | negative regulation of cell killing | 13/898 | 108/21069 | 0.0006854 | 0.04011 | 0.0374 | 13 | 0.01448 |
GO:0098742 | cell-cell adhesion via plasma-membrane adhesion molecules | 25/898 | 293/21069 | 0.0008149 | 0.04549 | 0.04242 | 25 | 0.02784 |
GO:0071709 | membrane assembly | 10/898 | 71/21069 | 0.0008218 | 0.04549 | 0.04242 | 10 | 0.01114 |
GO:0086010 | membrane depolarization during action potential | 7/898 | 37/21069 | 0.0008381 | 0.04549 | 0.04242 | 7 | 0.007795 |
GO:0051592 | response to calcium ion | 16/898 | 153/21069 | 0.0008476 | 0.04549 | 0.04242 | 16 | 0.01782 |
GO:0006198 | cAMP catabolic process | 4/898 | 11/21069 | 0.0008506 | 0.04549 | 0.04242 | 4 | 0.004454 |
GO:0015810 | aspartate transmembrane transport | 4/898 | 11/21069 | 0.0008506 | 0.04549 | 0.04242 | 4 | 0.004454 |
GO:0061669 | spontaneous neurotransmitter secretion | 4/898 | 11/21069 | 0.0008506 | 0.04549 | 0.04242 | 4 | 0.004454 |
GO:0072697 | protein localization to cell cortex | 4/898 | 11/21069 | 0.0008506 | 0.04549 | 0.04242 | 4 | 0.004454 |
GO:0120163 | negative regulation of cold-induced thermogenesis | 8/898 | 48/21069 | 0.0008753 | 0.04631 | 0.04319 | 8 | 0.008909 |
GO:0050808 | synapse organization | 36/898 | 484/21069 | 0.0009061 | 0.04744 | 0.04423 | 36 | 0.04009 |
GO:0002710 | negative regulation of T cell mediated immunity | 8/898 | 49/21069 | 0.001008 | 0.05167 | 0.04817 | 8 | 0.008909 |
GO:0050919 | negative chemotaxis | 8/898 | 49/21069 | 0.001008 | 0.05167 | 0.04817 | 8 | 0.008909 |
GO:0034308 | primary alcohol metabolic process | 14/898 | 127/21069 | 0.001048 | 0.05285 | 0.04928 | 14 | 0.01559 |
GO:0035249 | synaptic transmission, glutamatergic | 13/898 | 113/21069 | 0.001052 | 0.05285 | 0.04928 | 13 | 0.01448 |
GO:1901888 | regulation of cell junction assembly | 21/898 | 234/21069 | 0.001099 | 0.05468 | 0.05099 | 21 | 0.02339 |
These plots show connections among categories:
Enrichment map. Categories are connected by genes in common. Dot size indicates number of genes, dot color indicates adjusted p value.
Gene-concept network. Categories (brown dots) are linked by genes in common (gray dots). The size of category dots indicates gene count.
Barplot for enriched categories. Values on top have lower p values.
The category with lowest p value is neuron to neuron synapse (3.507641e-07), and the highest (among the lowest 10) is cation channel complex (0.0004858827). The ratio is 1385.212, i.e., they differ in 3 orders of magnitude.
ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | Count | GeneRatioCalc |
|---|---|---|---|---|---|---|---|---|
GO:0098984 | neuron to neuron synapse | 45/940 | 383/22283 | 5.856e-10 | 3.508e-07 | 2.983e-07 | 45 | 0.04787 |
GO:0032279 | asymmetric synapse | 42/940 | 357/22283 | 2.113e-09 | 6.327e-07 | 5.381e-07 | 42 | 0.04468 |
GO:0014069 | postsynaptic density | 41/940 | 351/22283 | 4.053e-09 | 8.092e-07 | 6.883e-07 | 41 | 0.04362 |
GO:0099572 | postsynaptic specialization | 41/940 | 374/22283 | 2.523e-08 | 3.778e-06 | 3.214e-06 | 41 | 0.04362 |
GO:0032398 | MHC class Ib protein complex | 7/940 | 14/22283 | 6.152e-07 | 7.37e-05 | 6.268e-05 | 7 | 0.007447 |
GO:0098858 | actin-based cell projection | 29/940 | 253/22283 | 1.11e-06 | 9.888e-05 | 8.41e-05 | 29 | 0.03085 |
GO:0045211 | postsynaptic membrane | 32/940 | 296/22283 | 1.156e-06 | 9.888e-05 | 8.41e-05 | 32 | 0.03404 |
GO:0097060 | synaptic membrane | 39/940 | 408/22283 | 1.867e-06 | 0.0001398 | 0.0001189 | 39 | 0.04149 |
GO:0034702 | ion channel complex | 32/940 | 323/22283 | 7.405e-06 | 0.0004859 | 0.0004133 | 32 | 0.03404 |
GO:0034703 | cation channel complex | 26/940 | 236/22283 | 8.112e-06 | 0.0004859 | 0.0004133 | 26 | 0.02766 |
GO:0005938 | cell cortex | 32/940 | 326/22283 | 8.957e-06 | 0.0004878 | 0.0004149 | 32 | 0.03404 |
GO:0098978 | glutamatergic synapse | 33/940 | 354/22283 | 1.904e-05 | 0.0009504 | 0.0008083 | 33 | 0.03511 |
GO:0019897 | extrinsic component of plasma membrane | 21/940 | 180/22283 | 2.497e-05 | 0.001151 | 0.0009786 | 21 | 0.02234 |
GO:0019898 | extrinsic component of membrane | 31/940 | 335/22283 | 3.88e-05 | 0.00166 | 0.001412 | 31 | 0.03298 |
GO:0044304 | main axon | 12/940 | 74/22283 | 5.822e-05 | 0.002194 | 0.001866 | 12 | 0.01277 |
GO:0031252 | cell leading edge | 38/940 | 457/22283 | 5.861e-05 | 0.002194 | 0.001866 | 38 | 0.04043 |
GO:0032045 | guanyl-nucleotide exchange factor complex | 6/940 | 18/22283 | 6.653e-05 | 0.002344 | 0.001994 | 6 | 0.006383 |
GO:0098839 | postsynaptic density membrane | 14/940 | 100/22283 | 7.747e-05 | 0.002527 | 0.00215 | 14 | 0.01489 |
GO:1990351 | transporter complex | 37/940 | 447/22283 | 8.016e-05 | 0.002527 | 0.00215 | 37 | 0.03936 |
GO:0097731 | 9+0 non-motile cilium | 17/940 | 140/22283 | 8.742e-05 | 0.002618 | 0.002227 | 17 | 0.01809 |
GO:0001750 | photoreceptor outer segment | 14/940 | 102/22283 | 9.643e-05 | 0.002751 | 0.002339 | 14 | 0.01489 |
GO:0042383 | sarcolemma | 17/940 | 147/22283 | 0.00016 | 0.004357 | 0.003705 | 17 | 0.01809 |
GO:0005891 | voltage-gated calcium channel complex | 9/940 | 49/22283 | 0.0001829 | 0.004762 | 0.004051 | 9 | 0.009574 |
GO:0097730 | non-motile cilium | 19/940 | 178/22283 | 0.0001961 | 0.004895 | 0.004163 | 19 | 0.02021 |
GO:1902495 | transmembrane transporter complex | 34/940 | 421/22283 | 0.0002438 | 0.005696 | 0.004844 | 34 | 0.03617 |
GO:0031256 | leading edge membrane | 20/940 | 196/22283 | 0.0002472 | 0.005696 | 0.004844 | 20 | 0.02128 |
GO:0030175 | filopodium | 15/940 | 128/22283 | 0.0003302 | 0.007064 | 0.006008 | 15 | 0.01596 |
GO:0099634 | postsynaptic specialization membrane | 15/940 | 128/22283 | 0.0003302 | 0.007064 | 0.006008 | 15 | 0.01596 |
GO:0034704 | calcium channel complex | 11/940 | 78/22283 | 0.0004161 | 0.008594 | 0.00731 | 11 | 0.0117 |
GO:0030863 | cortical cytoskeleton | 14/940 | 120/22283 | 0.0005394 | 0.01077 | 0.009161 | 14 | 0.01489 |
GO:0034705 | potassium channel complex | 12/940 | 94/22283 | 0.0005864 | 0.01133 | 0.009637 | 12 | 0.01277 |
GO:0120103 | centriolar subdistal appendage | 4/940 | 11/22283 | 0.0008185 | 0.01532 | 0.01303 | 4 | 0.004255 |
GO:0009898 | cytoplasmic side of plasma membrane | 18/940 | 187/22283 | 0.0009833 | 0.01785 | 0.01518 | 18 | 0.01915 |
GO:0097733 | photoreceptor cell cilium | 14/940 | 128/22283 | 0.001028 | 0.01811 | 0.0154 | 14 | 0.01489 |
GO:0016010 | dystrophin-associated glycoprotein complex | 5/940 | 20/22283 | 0.001207 | 0.02065 | 0.01756 | 5 | 0.005319 |
GO:0001726 | ruffle | 18/940 | 194/22283 | 0.001495 | 0.02487 | 0.02115 | 18 | 0.01915 |
GO:0099061 | integral component of postsynaptic density membrane | 8/940 | 53/22283 | 0.001599 | 0.02589 | 0.02202 | 8 | 0.008511 |
GO:0030864 | cortical actin cytoskeleton | 11/940 | 92/22283 | 0.001686 | 0.02621 | 0.02229 | 11 | 0.0117 |
GO:0032587 | ruffle membrane | 12/940 | 106/22283 | 0.001706 | 0.02621 | 0.02229 | 12 | 0.01277 |
GO:0009925 | basal plasma membrane | 23/940 | 279/22283 | 0.001783 | 0.0267 | 0.02271 | 23 | 0.02447 |
GO:0016342 | catenin complex | 6/940 | 32/22283 | 0.00196 | 0.02864 | 0.02436 | 6 | 0.006383 |
GO:0099146 | intrinsic component of postsynaptic density membrane | 8/940 | 56/22283 | 0.002293 | 0.03271 | 0.02782 | 8 | 0.008511 |
GO:0016323 | basolateral plasma membrane | 21/940 | 254/22283 | 0.002664 | 0.03711 | 0.03156 | 21 | 0.02234 |
GO:0008076 | voltage-gated potassium channel complex | 10/940 | 84/22283 | 0.002784 | 0.03745 | 0.03185 | 10 | 0.01064 |
GO:0098562 | cytoplasmic side of membrane | 19/940 | 222/22283 | 0.002835 | 0.03745 | 0.03185 | 19 | 0.02021 |
GO:0031307 | integral component of mitochondrial outer membrane | 5/940 | 24/22283 | 0.002876 | 0.03745 | 0.03185 | 5 | 0.005319 |
GO:0042612 | MHC class I protein complex | 7/940 | 46/22283 | 0.002954 | 0.03765 | 0.03203 | 7 | 0.007447 |
GO:0001917 | photoreceptor inner segment | 9/940 | 72/22283 | 0.003197 | 0.0399 | 0.03394 | 9 | 0.009574 |
GO:0031306 | intrinsic component of mitochondrial outer membrane | 5/940 | 25/22283 | 0.003472 | 0.04159 | 0.03538 | 5 | 0.005319 |
GO:0090665 | glycoprotein complex | 5/940 | 25/22283 | 0.003472 | 0.04159 | 0.03538 | 5 | 0.005319 |
GO:0043034 | costamere | 4/940 | 16/22283 | 0.003813 | 0.04421 | 0.0376 | 4 | 0.004255 |
GO:0099240 | intrinsic component of synaptic membrane | 16/940 | 179/22283 | 0.003859 | 0.04421 | 0.0376 | 16 | 0.01702 |
GO:0045178 | basal part of cell | 23/940 | 297/22283 | 0.003912 | 0.04421 | 0.0376 | 23 | 0.02447 |
GO:0043204 | perikaryon | 15/940 | 168/22283 | 0.005101 | 0.05659 | 0.04813 | 15 | 0.01596 |
GO:0031045 | dense core granule | 5/940 | 28/22283 | 0.005786 | 0.06189 | 0.05264 | 5 | 0.005319 |
GO:0031527 | filopodium membrane | 5/940 | 28/22283 | 0.005786 | 0.06189 | 0.05264 | 5 | 0.005319 |
GO:0099060 | integral component of postsynaptic specialization membrane | 9/940 | 80/22283 | 0.00647 | 0.06799 | 0.05783 | 9 | 0.009574 |
GO:0099568 | cytoplasmic region | 22/940 | 294/22283 | 0.006982 | 0.0721 | 0.06133 | 22 | 0.0234 |
GO:0030315 | T-tubule | 7/940 | 54/22283 | 0.007313 | 0.07425 | 0.06315 | 7 | 0.007447 |
GO:0031253 | cell projection membrane | 27/940 | 388/22283 | 0.007869 | 0.0768 | 0.06532 | 27 | 0.02872 |
GO:1905360 | GTPase complex | 6/940 | 42/22283 | 0.007944 | 0.0768 | 0.06532 | 6 | 0.006383 |
GO:0031514 | motile cilium | 20/940 | 262/22283 | 0.007954 | 0.0768 | 0.06532 | 20 | 0.02128 |
GO:0030658 | transport vesicle membrane | 24/940 | 334/22283 | 0.008115 | 0.0768 | 0.06532 | 24 | 0.02553 |
GO:0098948 | intrinsic component of postsynaptic specialization membrane | 9/940 | 83/22283 | 0.008205 | 0.0768 | 0.06532 | 9 | 0.009574 |
GO:0005930 | axoneme | 14/940 | 161/22283 | 0.008368 | 0.07712 | 0.06559 | 14 | 0.01489 |
GO:0097014 | ciliary plasm | 14/940 | 162/22283 | 0.008816 | 0.08001 | 0.06805 | 14 | 0.01489 |
GO:0005614 | interstitial matrix | 3/940 | 11/22283 | 0.009575 | 0.0856 | 0.07281 | 3 | 0.003191 |
GO:0032420 | stereocilium | 7/940 | 57/22283 | 0.009797 | 0.0863 | 0.0734 | 7 | 0.007447 |
GO:0045177 | apical part of cell | 31/940 | 474/22283 | 0.01092 | 0.09231 | 0.07851 | 31 | 0.03298 |
GO:0005902 | microvillus | 10/940 | 102/22283 | 0.01094 | 0.09231 | 0.07851 | 10 | 0.01064 |
GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane | 10/940 | 102/22283 | 0.01094 | 0.09231 | 0.07851 | 10 | 0.01064 |
GO:0150034 | distal axon | 21/940 | 290/22283 | 0.01171 | 0.09745 | 0.08289 | 21 | 0.02234 |
GO:0099699 | integral component of synaptic membrane | 14/940 | 168/22283 | 0.01191 | 0.0975 | 0.08293 | 14 | 0.01489 |
GO:0032838 | plasma membrane bounded cell projection cytoplasm | 19/940 | 255/22283 | 0.01211 | 0.0975 | 0.08293 | 19 | 0.02021 |
GO:0044224 | juxtaparanode region of axon | 3/940 | 12/22283 | 0.01237 | 0.0975 | 0.08293 | 3 | 0.003191 |
GO:1990454 | L-type voltage-gated calcium channel complex | 3/940 | 12/22283 | 0.01237 | 0.0975 | 0.08293 | 3 | 0.003191 |
GO:0016529 | sarcoplasmic reticulum | 8/940 | 74/22283 | 0.01256 | 0.09774 | 0.08313 | 8 | 0.008511 |
GO:0016528 | sarcoplasm | 9/940 | 90/22283 | 0.01361 | 0.1045 | 0.08891 | 9 | 0.009574 |
GO:0030027 | lamellipodium | 17/940 | 223/22283 | 0.01384 | 0.105 | 0.08928 | 17 | 0.01809 |
GO:0005770 | late endosome | 23/940 | 332/22283 | 0.01409 | 0.1055 | 0.08975 | 23 | 0.02447 |
GO:0035097 | histone methyltransferase complex | 8/940 | 76/22283 | 0.01461 | 0.1065 | 0.09054 | 8 | 0.008511 |
GO:0030673 | axolemma | 4/940 | 23/22283 | 0.01468 | 0.1065 | 0.09054 | 4 | 0.004255 |
GO:0030018 | Z disc | 12/940 | 139/22283 | 0.01475 | 0.1065 | 0.09054 | 12 | 0.01277 |
GO:0005834 | heterotrimeric G-protein complex | 5/940 | 35/22283 | 0.015 | 0.107 | 0.09101 | 5 | 0.005319 |
GO:0030426 | growth cone | 14/940 | 175/22283 | 0.01653 | 0.1165 | 0.09906 | 14 | 0.01489 |
GO:0043197 | dendritic spine | 15/940 | 194/22283 | 0.01778 | 0.1239 | 0.1053 | 15 | 0.01596 |
GO:0005912 | adherens junction | 15/940 | 195/22283 | 0.01854 | 0.1262 | 0.1073 | 15 | 0.01596 |
GO:0044309 | neuron spine | 15/940 | 195/22283 | 0.01854 | 0.1262 | 0.1073 | 15 | 0.01596 |
GO:1990531 | phospholipid-translocating ATPase complex | 3/940 | 14/22283 | 0.01922 | 0.1288 | 0.1095 | 3 | 0.003191 |
GO:0005771 | multivesicular body | 7/940 | 65/22283 | 0.01935 | 0.1288 | 0.1095 | 7 | 0.007447 |
GO:0032421 | stereocilium bundle | 7/940 | 66/22283 | 0.02088 | 0.1375 | 0.1169 | 7 | 0.007447 |
GO:0030427 | site of polarized growth | 14/940 | 181/22283 | 0.02147 | 0.1398 | 0.1189 | 14 | 0.01489 |
GO:0044753 | amphisome | 3/940 | 15/22283 | 0.02329 | 0.1495 | 0.1272 | 3 | 0.003191 |
GO:0016324 | apical plasma membrane | 26/940 | 406/22283 | 0.02346 | 0.1495 | 0.1272 | 26 | 0.02766 |
GO:0098685 | Schaffer collateral - CA1 synapse | 8/940 | 84/22283 | 0.02526 | 0.1591 | 0.1353 | 8 | 0.008511 |
GO:1902710 | GABA receptor complex | 4/940 | 27/22283 | 0.02549 | 0.1591 | 0.1353 | 4 | 0.004255 |
GO:0031674 | I band | 12/940 | 152/22283 | 0.02761 | 0.1664 | 0.1416 | 12 | 0.01277 |
GO:0097225 | sperm midpiece | 6/940 | 55/22283 | 0.02776 | 0.1664 | 0.1416 | 6 | 0.006383 |
GO:0000145 | exocyst | 3/940 | 16/22283 | 0.02778 | 0.1664 | 0.1416 | 3 | 0.003191 |
GO:0036128 | CatSper complex | 3/940 | 16/22283 | 0.02778 | 0.1664 | 0.1416 | 3 | 0.003191 |
These plots show connections among categories:
Enrichment map. Categories are connected by genes in common. Dot size indicates number of genes, dot color indicates adjusted p value.
Gene-concept network. Categories (brown dots) are linked by genes in common (gray dots). The size of category dots indicates gene count.
Here it is a barplot of most significantly enriched DO categories.
Barplot for enriched categories. Values on top have lower p values.
The most significant category was ‘autism spectrum disorder’.
Here it is a barplot of most significantly enriched NCG categories.
Barplot for enriched categories. Values on top have lower p values.
The most significant category was clear_cell_renal_cancer.